RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 IPMKQ8NFU5 416 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TTLQ8NG68 377 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 OR4M2Q8NGB6 313 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CREB3L4Q8TEY5 395 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ACOT12Q8WYK0 555 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 RBPMSQ93062 196 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 SGTBQ96EQ0 304 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SERPINB11Q96P15 392 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 QRFPRQ96P65 431 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 OR2M2Q96R28 347 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SECISBP2Q96T21 854 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 KCNJ15Q99712 375 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 TBCDQ9BTW9 1192 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 HDHD5Q9BXW7 423 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SLC29A3Q9BZD2 475 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 DPY30Q9C005 99 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SHARPINQ9H0F6 387 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ACTL8Q9H568 366 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 FZD3Q9NPG1 666 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 ABCB8Q9NUT2 735 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 CLN6Q9NWW5 311 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 NDUFB11Q9NX14 153 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 FBXO10Q9UK96 956 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 DIMT1Q9UNQ2 313 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 PRELID3BQ9Y3B1 194 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 SAMHD1Q9Y3Z3 626 aaKnown RBP6.44□□□□□ -1.38
USP28-207ENST00000538475 ASB1Q9Y576 335 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 MAB21L2Q9Y586 359 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 U3KQE9 123 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 NINQ8N4C6 2090 aa6.44□□□□□ -1.38
USP28-207ENST00000538475 A0A0U1RQS6 177 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 A0A1B0GW55 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 UBA6A0AVT1 1052 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 WASHC1A8K0Z3 465 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 KPNA3O00505 521 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 PLA2G10O15496 165 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 RGS5O15539 181 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 LYRM1O43325 122 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 SSX4O60224 188 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 SLC19A2O60779 497 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 MITFO75030 526 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 PMPCBO75439 489 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 BPNT1O95861 308 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 MT-CO1P00395 513 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ESR1P03372 595 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 FGF1P05230 155 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 S100A6P06703 90 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 TSPAN19P0C672 248 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L2P0CJ85 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L3P0CJ86 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L4P0CJ87 422 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L5P0CJ88 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L6P0CJ89 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DUX4L7P0CJ90 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 G6PDP11413 515 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ANXA3P12429 323 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ARSBP15848 533 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 HOXB9P17482 250 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 GPX2P18283 190 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 HLA-DPA1P20036 260 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 BMP8BP34820 402 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 GRK5P34947 590 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 RPS19P39019 145 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 RECQLP46063 649 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 PIK3CGP48736 1102 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CLCN4P51793 760 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ATXN1P54253 815 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 ATP12AP54707 1039 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 WNT3AP56704 352 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CLDN8P56748 225 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 SNRPGP62308 76 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 SNTA1Q13424 505 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 GTF2H3Q13889 308 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 C1DQ13901 141 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 SLBPQ14493 270 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP28-207ENST00000538475 OR4D1Q15615 310 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ZBTB6Q15916 424 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 RBBP7Q16576 425 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 SMN1Q16637 294 aaKnown RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 WSCD2Q2TBF2 565 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 AP5B1Q2VPB7 878 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ZNF628Q5EBL2 1059 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CARD16Q5EG05 197 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CDKL4Q5MAI5 379 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 ANKRD54Q6NXT1 300 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 TFAP2EQ6VUC0 442 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CEP68Q76N32 757 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 KRT74Q7RTS7 529 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 DGLUCYQ7Z3D6 616 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 BMP8AQ7Z5Y6 402 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 GALNT5Q7Z7M9 940 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 COMMD7Q86VX2 200 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 CCDC71Q8IV32 467 aaPredicted RBP6.43□□□□□ -1.38
USP28-207ENST00000538475 NPWQ8N729 165 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 LINC00469Q8N7U9 141 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 REPS2Q8NFH8 660 aa6.43□□□□□ -1.38
USP28-207ENST00000538475 OR6B3Q8NGW1 331 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms