RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BROXQ5VW32 411 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ZNF773Q6PK81 442 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SMYD1Q8NB12 490 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PIK3C3Q8NEB9 887 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SARGQ9BW04 601 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 OSGEPL1Q9H4B0 414 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 TMEM184CQ9NVA4 438 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TAS2R7Q9NYW3 318 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 EHD3Q9NZN3 535 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PLAGL1Q9UM63 463 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CEPT1Q9Y6K0 416 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ATG2AQ2TAZ0 1938 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CKAP5Q14008 2032 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3EA0A087X179 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3KA0A087X1G2 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3FA6NER0 549 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 A8MVJ9 347 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PLPP1O14494 284 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PFDN1O60925 122 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SH3BGRLO75368 114 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 JRKO75564 520 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 C9P02748 559 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3HP0C7X1 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 IGFBP5P24593 272 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 CTHP32929 405 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 BSGP35613 385 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 AHRP35869 848 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 PSMD7P51665 324 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 MEF2AQ02078 507 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 GRSF1Q12849 480 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMG6-203ENST00000536871 HTR4Q13639 388 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 FGL2Q14314 439 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 SF1Q15637 639 aaKnown RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3GQ6DHY5 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 OFCC1Q8IZS5 231 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 NAGSQ8N159 534 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ZBED6CLQ96FA7 236 aaPredicted RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 ACAT2Q9BWD1 397 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 FAIM2Q9BWQ8 316 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 KIR3DX1Q9H7L2 352 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 DDX31Q9H8H2 851 aaKnown RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ENOPH1Q9UHY7 261 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ZNF232Q9UNY5 417 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 ERVK-11Q9UQG0 969 aa12.97□□□□□ -0.33
SMG6-203ENST00000536871 SAMHD1Q9Y3Z3 626 aaKnown RBP12.97□□□□□ -0.33
SMG6-203ENST00000536871 TMEM221A6NGB7 291 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 NDUFS4O43181 175 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
SMG6-203ENST00000536871 OR6B1O95007 311 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 NTRK1P04629 796 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 CCDC159P0C7I6 412 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 ACADMP11310 421 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 JUNBP17275 347 aaPredicted RBP12.96□□□□□ -0.33
SMG6-203ENST00000536871 IGFALSP35858 605 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 MVDP53602 400 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 SEC13P55735 322 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 CXCR4P61073 352 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 CSNK1G2P78368 415 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 KCNAB2Q13303 367 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 SCARB2Q14108 478 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 ZIK1Q3SY52 487 aaPredicted RBP12.96□□□□□ -0.33
SMG6-203ENST00000536871 IFI44LQ53G44 452 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMG6-203ENST00000536871 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 ANGPTL8Q6UXH0 198 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 IL17RCQ8NAC3 791 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 ZNF566Q969W8 418 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 OR2M4Q96R27 311 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 APOL4Q9BPW4 351 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 SLC6A16Q9GZN6 736 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
SMG6-203ENST00000536871 SMURF2Q9HAU4 748 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 TM7SF3Q9NS93 570 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 TMEM9Q9P0T7 183 aa12.96□□□□□ -0.33
SMG6-203ENST00000536871 MYOCOSA0A1B0GUC4 107 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PDZK1P1A8MUH7 402 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 H7BY64 318 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 SAP18O00422 153 aaKnown RBP12.95□□□□□ -0.34
SMG6-203ENST00000536871 TNFRSF10CO14798 259 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PDPK1O15530 556 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 OR1F1O43749 312 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 PDE9AO76083 593 aa12.95□□□□□ -0.34
SMG6-203ENST00000536871 APBB3O95704 486 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms