RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ASAH2Q9NR71 780 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ALG5Q9Y673 324 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 HNRNPCL2B2RXH8 293 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ATG13O75143 517 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 OLFM2O95897 454 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ITGAMP11215 1152 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 HMGCLP35914 325 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 HK3P52790 923 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 RGS1Q08116 209 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 MPPE1Q53F39 396 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 ZSWIM9Q86XI8 627 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 FNDC5Q8NAU1 212 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 FBLIM1Q8WUP2 373 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 MCCC1Q96RQ3 725 aaPredicted RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 CNPPD1Q9BV87 410 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 PPA2Q9H2U2 334 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 POPDC3Q9HBV1 291 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 EIF2B4Q9UI10 523 aaKnown RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 RANBP2P49792 3224 aaKnown RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 NEDD8-MDP1E9PL57 170 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 PCDHGA12O60330 932 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 DFNA5O60443 496 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 VIPP01282 170 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 PROS1P07225 676 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 KIR2DL3P43628 341 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 CXCR4P61073 352 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 AP1S1P61966 158 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 GPR19Q15760 415 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 LETMD1Q6P1Q0 360 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 RFLNAQ6ZTI6 216 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 LINC00597Q9H2U6 94 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 SAV1Q9H4B6 383 aaPredicted RBP13.44□□□□□ -0.26
LIG1-203ENST00000536218 IL1RAPQ9NPH3 570 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 VPS9D1Q9Y2B5 631 aa13.44□□□□□ -0.26
LIG1-203ENST00000536218 TSPAN12O95859 305 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 ADH1AP07327 375 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 HLA-FP30511 346 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 PTGER3P43115 390 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 DAPP51397 102 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 NTHL1P78549 312 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CACNG1Q06432 222 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 ELP6Q0PNE2 266 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 GPR68Q15743 365 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 AANATQ16613 207 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 Q6ZPB1 254 aaPredicted RBP13.43□□□□□ -0.26
LIG1-203ENST00000536218 HTR3DQ70Z44 454 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CEP68Q76N32 757 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 ZNF680Q8NEM1 530 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 IPCEF1Q8WWN9 437 aaPredicted RBP13.43□□□□□ -0.26
LIG1-203ENST00000536218 FCGR1BQ92637 280 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 APOL5Q9BWW9 433 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 ZDHHC6Q9H6R6 413 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 IL26Q9NPH9 171 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CRLS1Q9UJA2 301 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 KLHL21Q9UJP4 597 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 GMEB2Q9UKD1 530 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 PRSS21Q9Y6M0 314 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 LINC00862A6NCI5 91 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 PRR23AA6NEV1 266 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 STSP08842 583 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 ACADMP11310 421 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 RGS6P49758 472 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 NFKB2Q00653 900 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 MED22Q15528 200 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CHRNA6Q15825 494 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CCNJQ5T5M9 372 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CACHD1Q5VU97 1274 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 SLC44A2Q8IWA5 706 aaPredicted RBP13.43□□□□□ -0.26
LIG1-203ENST00000536218 ZNF583Q96ND8 569 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 FANCFQ9NPI8 374 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
LIG1-203ENST00000536218 CXCR6O00574 342 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 PI15O43692 258 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 WBP4O75554 376 aaKnown RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 ZNF682O95780 498 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 LATS1O95835 1130 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 IGSF6O95976 241 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 GLUD1P00367 558 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 SERPINA1P01009 418 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 TRBC1P01850 177 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ALPPP05187 535 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ETV6P41212 452 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 MXD1Q05195 221 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 LCP2Q13094 533 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 PRKG2Q13237 762 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 TEAD2Q15562 447 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 ZNF79Q15937 498 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 C1orf53Q5VUE5 145 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 CAPN13Q6MZZ7 669 aaPredicted RBP13.42□□□□□ -0.26
LIG1-203ENST00000536218 STX19Q8N4C7 294 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 LKAAEAR1Q8TD35 194 aa13.42□□□□□ -0.26
LIG1-203ENST00000536218 RHBDF1Q96CC6 855 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms