RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LBPP18428 481 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 AZU1P20160 251 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 LMO2P25791 158 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 PSMB4P28070 264 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 FCGR2BP31994 310 aaPredicted RBP3.99□□□□□ -1.77
PRKDC-205ENST00000535375 FCGR2CP31995 323 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 RPL9P32969 192 aaKnown RBP3.99□□□□□ -1.77
PRKDC-205ENST00000535375 SLC1A3P43003 542 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 KHKP50053 298 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 ACY1Q03154 408 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 AGAP7PQ5VUJ5 663 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 SLC27A4Q6P1M0 643 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 SLFN11Q7Z7L1 901 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 KCNMB4Q86W47 210 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 C4orf19Q8IY42 314 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 GPD1LQ8N335 351 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 RHOXF1Q8NHV9 184 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 SETD6Q8TBK2 473 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 ST6GALNAC6Q969X2 333 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 GBP5Q96PP8 586 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 RAB9BQ9NP90 201 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 NOL7Q9UMY1 257 aaKnown RBP3.99□□□□□ -1.77
PRKDC-205ENST00000535375 KLK4Q9Y5K2 254 aa3.99□□□□□ -1.77
PRKDC-205ENST00000535375 HTR3EA5X5Y0 456 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 FAM86B1E9PN63 330 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 PHF1O43189 567 aaPredicted RBP3.98□□□□□ -1.77
PRKDC-205ENST00000535375 HSPA4LO95757 839 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 FAM86B2P0C5J1 330 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 BCL3P20749 454 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 CRYBA2P53672 197 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 KRT83P78385 493 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 CETN1Q12798 172 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 ABRQ12979 859 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 SIX1Q15475 284 aaPredicted RBP3.98□□□□□ -1.77
PRKDC-205ENST00000535375 MAPK11Q15759 364 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 KNOP1Q1ED39 458 aaKnown RBP3.98□□□□□ -1.77
PRKDC-205ENST00000535375 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 TMEM182Q6ZP80 229 aaPredicted RBP3.98□□□□□ -1.77
PRKDC-205ENST00000535375 RFPL4BQ6ZWI9 263 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 MCM10Q7L590 875 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 VSIG1Q86XK7 387 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 ZC3H3Q8IXZ2 948 aaKnown RBP3.98□□□□□ -1.77
PRKDC-205ENST00000535375 CSNK1G2-AS1Q8NCQ2 148 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 Q8NFD4 153 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 TAAR6Q96RI8 345 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 WDR41Q9HAD4 459 aa3.98□□□□□ -1.77
PRKDC-205ENST00000535375 A8MU10 97 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 MT-ND1P03886 318 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 ADRA2CP18825 462 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 TFCP2Q12800 502 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 SCARB2Q14108 478 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 CDO1Q16878 200 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 ARMCX4Q5H9R4 360 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 HECTD3Q5T447 861 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 TXNRD3NBQ6F5E7 133 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 VITQ6UXI7 678 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 MEX3DQ86XN8 651 aaKnown RBP3.97□□□□□ -1.77
PRKDC-205ENST00000535375 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 FGFRL1Q8N441 504 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 RIT1Q92963 219 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 C11orf52Q96A22 123 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 EXOC4Q96A65 974 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 BSCL2Q96G97 398 aaPredicted RBP3.97□□□□□ -1.77
PRKDC-205ENST00000535375 CCDC28BQ9BUN5 200 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 TRIM7Q9C029 511 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 C5orf66Q9H5L9 145 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 PCDHGA1Q9Y5H4 931 aa3.97□□□□□ -1.77
PRKDC-205ENST00000535375 A0A1B0GTH9 108 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 C2orf92A0A1B0GVN3 265 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ZNF840PA6NDX5 716 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 LMO7DNF2Z398 122 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 MLNRO43193 412 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 FAM58BPP0C7Q3 252 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 TSPY3P0CV98 308 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 TSPY8P0CW00 308 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 DNAH10OSP0CZ25 163 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 DLATP10515 647 aaKnown RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 SCG2P13521 617 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 PRKCIP41743 596 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 PTENP60484 403 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 TSPY1Q01534 308 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 CNTN1Q12860 1018 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ECSCRQ19T08 205 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 CARM1Q86X55 608 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 FAM9BQ8IZU0 186 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 CARNMT1Q8N4J0 409 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 RTL3Q8N8U3 475 aaKnown RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ANKRD27Q96NW4 1050 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ALKBH3Q96Q83 286 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ALDH8A1Q9H2A2 487 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 MTIF3Q9H2K0 278 aaKnown RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 UBE2TQ9NPD8 197 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 MRGBPQ9NV56 204 aa3.96□□□□□ -1.78
PRKDC-205ENST00000535375 ZNF107Q9UII5 783 aaPredicted RBP3.96□□□□□ -1.78
PRKDC-205ENST00000535375 NOCTQ9UK39 431 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms