RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 C3orf18Q9UK00 162 aa13.25□□□□□ -0.29
VPS11-205ENST00000534551 POLHQ9Y253 713 aa13.25□□□□□ -0.29
VPS11-205ENST00000534551 IDSB3KWA1 339 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 FAM227AF5H4B4 570 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 AGPSO00116 658 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 SOCS6O14544 535 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS11-205ENST00000534551 CHST10O43529 356 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 BMP10O95393 424 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 GSTM2P28161 218 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
VPS11-205ENST00000534551 LCP2Q13094 533 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 RUNX2Q13950 521 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 MPP2Q14168 576 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 MINDY4Q4G0A6 757 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 GGTA1PQ4G0N0 100 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 LIPMQ5VYY2 423 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 TRIM40Q6P9F5 258 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 ABHD17CQ6PCB6 329 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 FRMD7Q6ZUT3 714 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 LANCL3Q6ZV70 420 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 RAB43Q86YS6 212 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 CA13Q8N1Q1 262 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 FAM47BQ8NA70 645 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 TSLPQ969D9 159 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 GATA5Q9BWX5 397 aaPredicted RBP13.24□□□□□ -0.29
VPS11-205ENST00000534551 ZNF717Q9BY31 904 aaPredicted RBP13.24□□□□□ -0.29
VPS11-205ENST00000534551 SEMA4CQ9C0C4 833 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 MID1IP1Q9NPA3 183 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 MKKSQ9NPJ1 570 aaPredicted RBP13.24□□□□□ -0.29
VPS11-205ENST00000534551 TIMM22Q9Y584 194 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 KCNMB2Q9Y691 235 aa13.24□□□□□ -0.29
VPS11-205ENST00000534551 CPAMD8Q8IZJ3 1885 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 IGHV3-20A0A0C4DH32 117 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 WDR91A4D1P6 747 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PLPP1O14494 284 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 B4GALT2O60909 372 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PRKRAO75569 313 aaKnown RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 RECKO95980 971 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PDYNP01213 254 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 CHRNGP07510 517 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 CHN1P15882 459 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 ARRB2P32121 409 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 ETV4P43268 484 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 DNAJB13P59910 316 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 LY6DQ14210 128 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 CRTC2Q53ET0 693 aaPredicted RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 KHDRBS2Q5VWX1 349 aaKnown RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 CES4AQ5XG92 561 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 FRG2Q64ET8 278 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 TTC19Q6DKK2 380 aaPredicted RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 BORAQ6PGQ7 559 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 SCIMPQ6UWF3 145 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 TMEM52Q8NDY8 209 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PGM2Q96G03 612 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 FRG2BQ96QU4 278 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 TMBIM4Q9HC24 238 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PRDM7Q9NQW5 492 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 LANCL2Q9NS86 450 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 C14orf105Q9NVL8 296 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 P4HTMQ9NXG6 502 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 TRPS1Q9UHF7 1281 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 MID2Q9UJV3 735 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 FBXL4Q9UKA2 621 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
VPS11-205ENST00000534551 MKL2Q9ULH7 1088 aa13.23□□□□□ -0.29
VPS11-205ENST00000534551 PIEZO2Q9H5I5 2752 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 URADA6NGE7 173 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 EEDO75530 441 aaKnown RBP13.22□□□□□ -0.29
VPS11-205ENST00000534551 GBAP04062 536 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 HEXBP07686 556 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 CELA2AP08217 269 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 NR1D1P20393 614 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 MMP11P24347 488 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 PIK3CBP42338 1070 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 SSR2P43308 183 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 EMP2P54851 167 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 POLE2P56282 527 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 RAPSNQ13702 412 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 SSPNQ14714 243 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 KIRREL2Q6UWL6 708 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 ANKRD42Q8N9B4 389 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 SELENOMQ8WWX9 145 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 REPS1Q96D71 796 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 CMTM7Q96FZ5 175 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 FAR2Q96K12 515 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
VPS11-205ENST00000534551 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms