RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ANKZF1Q9H8Y5 726 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 PPIEQ9UNP9 301 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 TCRBV16S1A1N1A0A5B0 115 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 FOXE1O00358 373 aaPredicted RBP9.26□□□□□ -0.93
NUP98-220ENST00000533346 DNAJB6O75190 326 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 JRKO75564 520 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 WISP1O95388 367 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 STATHP02808 62 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 RPS17P08708 135 aaKnown RBP9.26□□□□□ -0.93
NUP98-220ENST00000533346 PRR35P0CG20 571 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 RNH1P13489 461 aaKnown RBP9.26□□□□□ -0.93
NUP98-220ENST00000533346 GFAPP14136 432 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 ITGA3P26006 1051 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 GLRBP48167 497 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 MTTPP55157 894 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 HSD17B7P56937 341 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 RAB38P57729 211 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 RAB8AP61006 207 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 NAA20P61599 178 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 FOXK1P85037 733 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TLE1Q04724 770 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TGM3Q08188 693 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 MFAP5Q13361 173 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 CUL3Q13618 768 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 GTF2H2Q13888 395 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TERF2Q15554 542 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 EXT1Q16394 746 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 FBXO48Q5FWF7 155 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TOR1AIP1Q5JTV8 583 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 DEPDC1Q5TB30 811 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 GTF2H2CQ6P1K8 395 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TRIM40Q6P9F5 258 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 ISLR2Q6UXK2 745 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 CHSY3Q70JA7 882 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 ANKRD37Q7Z713 158 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 SCUBE1Q8IWY4 988 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 LGI4Q8N135 537 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 TEX9Q8N6V9 391 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 SNX31Q8N9S9 440 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 Q8NA96 180 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 OR5T3Q8NGG3 340 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 WDR20Q8TBZ3 569 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 HAS2Q92819 552 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 MIB2Q96AX9 1013 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 C8orf44Q96CB5 159 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 REPS1Q96D71 796 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 CMTM7Q96FZ5 175 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 PEX11GQ96HA9 241 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 THOC3Q96J01 351 aaKnown RBP9.26□□□□□ -0.93
NUP98-220ENST00000533346 FAR2Q96K12 515 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 MESP1Q9BRJ9 268 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 IPPKQ9H8X2 491 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 ZNF160Q9HCG1 818 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 LYRM4Q9HD34 91 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 MMP25Q9NPA2 562 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 HCN3Q9P1Z3 774 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 PSMC3IPQ9P2W1 217 aaPredicted RBP9.26□□□□□ -0.93
NUP98-220ENST00000533346 XPR1Q9UBH6 696 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 DCDC2Q9UHG0 476 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 DAPP1Q9UN19 280 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 CLDN16Q9Y5I7 305 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 COL12A1Q99715 3063 aa9.26□□□□□ -0.93
NUP98-220ENST00000533346 SHANK1Q9Y566 2161 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 A6NL46 340 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 CYR61O00622 381 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 OR7A17O14581 309 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 FFAR3O14843 346 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 GPR42O15529 346 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 ERI3O43414 337 aaKnown RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 SMIM24O75264 130 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 CLDN9O95484 217 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 SERPIND1P05546 499 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 NUDT17P0C025 328 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 BTN3A2P78410 334 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 BIKQ13323 160 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 RUNX2Q13950 521 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 RCN2Q14257 317 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 NSDHLQ15738 373 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 NADK2Q4G0N4 442 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 IRAK1BP1Q5VVH5 260 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 KHDRBS2Q5VWX1 349 aaKnown RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 B3GNTL1Q67FW5 361 aaPredicted RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 GOLGA7Q7Z5G4 137 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 UBE3DQ7Z6J8 389 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 LURAP1LQ8IV03 231 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 ZNF595Q8IYB9 648 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 PRSS58Q8IYP2 241 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 ZCCHC7Q8N3Z6 543 aaKnown RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 PTGR2Q8N8N7 351 aaPredicted RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 UHMK1Q8TAS1 419 aaKnown RBP9.25□□□□□ -0.93
NUP98-220ENST00000533346 ELP5Q8TE02 316 aa9.25□□□□□ -0.93
NUP98-220ENST00000533346 ZNF483Q8TF39 744 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms