RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RNF175Q8N4F7 328 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ARRDC2Q8TBH0 407 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 BPIFB1Q8TDL5 484 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 KCNN1Q92952 543 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 HIST1H2ACQ93077 130 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 RBM18Q96H35 190 aaKnown RBP11.8□□□□□ -0.52
BDNF-218ENST00000533246 EGLN2Q96KS0 407 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 SLC22A12Q96S37 553 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 MRPS30Q9NP92 439 aaKnown RBP11.8□□□□□ -0.52
BDNF-218ENST00000533246 WASH6PQ9NQA3 447 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 AASSQ9UDR5 926 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 NME7Q9Y5B8 376 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ZNF860A6NHJ4 632 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 SLC35G6P0C7Q6 338 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 OXTRP30559 389 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 APLP1P51693 650 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 PPIGQ13427 754 aaKnown RBP eCLIP11.8□□□□□ -0.52
BDNF-218ENST00000533246 IL18R1Q13478 541 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ALKAL1Q6UXT8 129 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 LRRC70Q7Z2Q7 622 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 IGFN1Q86VF2 1251 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 NPAS3Q8IXF0 933 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CADM3Q8N126 398 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 GPR151Q8TDV0 419 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ELOVL2Q9NXB9 296 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 C5AR2Q9P296 337 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 USP3Q9Y6I4 520 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 AHDC1Q5TGY3 1603 aaPredicted RBP11.8□□□□□ -0.52
BDNF-218ENST00000533246 FAM240BA0A1B0GVZ2 78 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 NDUFS4O43181 175 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 NUAK1O60285 661 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 PROS1P07225 676 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CBX5P45973 191 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 NRIP1P48552 1158 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CDKL1Q00532 357 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 RAB43Q86YS6 212 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 HMGB4Q8WW32 186 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 SGCDQ92629 289 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 GFM1Q96RP9 751 aaKnown RBP11.8□□□□□ -0.52
BDNF-218ENST00000533246 BEX2Q9BXY8 128 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 CSNK1G1Q9HCP0 422 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ING3Q9NXR8 418 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ANKMY1Q9P2S6 941 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ABCG2Q9UNQ0 655 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 HSPB11Q9Y547 144 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 A0A1B0GUL6 1792 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 ASXL3Q9C0F0 2248 aa11.8□□□□□ -0.52
BDNF-218ENST00000533246 TRAV20A0A0B4J274 112 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 NPIPB15A6NHN6 443 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 SLC16A8O95907 504 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 GNAO1P09471 354 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 DNAJB1P25685 340 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 CMPK1P30085 196 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 RAB25P57735 213 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SKP1P63208 163 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 CD200R1Q8TD46 325 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SNAPC3Q92966 411 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 GLYATL1Q969I3 302 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 C11orf84Q9BUA3 381 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 SPHK2Q9NRA0 654 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 USP22Q9UPT9 525 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 BTAF1O14981 1849 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 TGM5O43548 720 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MITFO75030 526 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 ACRV1P26436 265 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 KDELR2P33947 212 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MAP2K4P45985 399 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 OR3A3P47888 321 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 PRR5P85299 388 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 CYBRD1Q53TN4 286 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 ADGRG6Q86SQ4 1221 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MZB1Q8WU39 189 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 DNAJC27Q9NZQ0 273 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 IKZF2Q9UKS7 526 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 CEPT1Q9Y6K0 416 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SPTA1P02549 2419 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 SPTBN2O15020 2390 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 POLR1CO15160 346 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 PGRMC2O15173 223 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 TLX2O43763 284 aaPredicted RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 PLATP00750 562 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 F8A1P23610 371 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 RFC2P35250 354 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 LARS2Q15031 903 aaKnown RBP11.79□□□□□ -0.52
BDNF-218ENST00000533246 RAB41Q5JT25 222 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
BDNF-218ENST00000533246 LRRTM4Q86VH4 590 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms