RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HAS2Q92819 552 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 LPAR4Q99677 370 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 RHBGQ9H310 441 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 OPTCQ9UBM4 332 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 NTNG1Q9Y2I2 539 aa28.48■■■□□ 2.15
SSSCA1-207ENST00000533115 PRMT3O60678 531 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 INHBAP08476 426 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 E2F2Q14209 437 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 ADPRMQ3LIE5 342 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 ADNP2Q6IQ32 1131 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 M1APQ8TC57 530 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 PTCHD1Q96NR3 888 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 BARD1Q99728 777 aaKnown RBP28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 NPLQ9BXD5 320 aaPredicted RBP28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 REXO4Q9GZR2 422 aaKnown RBP28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 TEKT2Q9UIF3 430 aa28.47■■■□□ 2.15
SSSCA1-207ENST00000533115 HECTD1Q9ULT8 2610 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 COL12A1Q99715 3063 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 A0A0G2JN53 185 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 BTG2P78543 158 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 ABHD17BQ5VST6 288 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 KLC3Q6P597 504 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 OR2L5Q8NG80 312 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 OR1N1Q8NGS0 311 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 GPR78Q96P69 363 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 PAFAH2Q99487 392 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 VPS11Q9H270 941 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 IKBKGQ9Y6K9 419 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 CPAMD8Q8IZJ3 1885 aa28.46■■■□□ 2.15
SSSCA1-207ENST00000533115 A0A088AWK7 358 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 FAM227AF5H4B4 570 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF10P21506 573 aaPredicted RBP28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 SERPINB9P50453 376 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 TNFSF10P50591 281 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 PLA2G16P53816 162 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 PCDH1Q08174 1060 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 MRPL49Q13405 166 aaKnown RBP28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 RUNX2Q13950 521 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 NR6A1Q15406 480 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 TRIM40Q6P9F5 258 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 MAGEB10Q96LZ2 347 aaPredicted RBP28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 QRFPRQ96P65 431 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 RNF32Q9H0A6 362 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 KCNK13Q9HB14 408 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 MMP25Q9NPA2 562 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 PRDM9Q9NQV7 894 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 AGPAT4Q9NRZ5 378 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 STMN3Q9NZ72 180 aa28.45■■■□□ 2.14
SSSCA1-207ENST00000533115 PTPN13Q12923 2485 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 A8MUI8 341 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 WDPCPO95876 746 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 GFAPP14136 432 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 EPB42P16452 691 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 MAOAP21397 527 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF33BQ06732 778 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 SETDB1Q15047 1291 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 PFKFB4Q16877 469 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 H3F3CQ6NXT2 135 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 RPUSD3Q6P087 351 aaKnown RBP28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 TAOK1Q7L7X3 1001 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 UBE2E3Q969T4 207 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 ISL2Q96A47 359 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 NFU1Q9UMS0 254 aa28.44■■■□□ 2.14
SSSCA1-207ENST00000533115 ESPL1Q14674 2120 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 A0A087WUV0 522 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 B3GALT2O43825 422 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 F10P00742 488 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 MSH2P43246 934 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 MAGEA12P43365 314 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 NAA30Q147X3 362 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 ABHD17CQ6PCB6 329 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 IFT20Q8IY31 132 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 TEX9Q8N6V9 391 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 UHMK1Q8TAS1 419 aaKnown RBP28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF354BQ96LW1 612 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 F2RL3Q96RI0 385 aa28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 USP9XQ93008 2570 aaPredicted RBP28.43■■■□□ 2.14
SSSCA1-207ENST00000533115 IGKV3D-11A0A0A0MRZ8 115 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 TRAV17A0A0B4J275 112 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 TCRBV16S1A1N1A0A5B0 115 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 POC1B-GALNT4F8VUJ3 575 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 KLK8O60259 260 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 KRT38O76015 456 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 CBX6O95503 412 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 ALDH18A1P54886 795 aaKnown RBP28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 RAB38P57729 211 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 SLC26A5P58743 744 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 TGM3Q08188 693 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 FHL5Q5TD97 284 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 MED27Q6P2C8 311 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 LAS2Q8IYD9 372 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 CYP4X1Q8N118 509 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 PLD6Q8N2A8 252 aaKnown RBP28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 ARMC2Q8NEN0 867 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 SERINC2Q96SA4 455 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 NECTIN3Q9NQS3 549 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 ZNF180Q9UJW8 692 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 MMACHCQ9Y4U1 282 aa28.42■■■□□ 2.14
SSSCA1-207ENST00000533115 ANGPTL3Q9Y5C1 460 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms