RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ZNF33BQ06732 778 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 CUL3Q13618 768 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 AP5B1Q2VPB7 878 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 TRIM42Q8IWZ5 723 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 HOMEZQ8IX15 550 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 ZSCAN1Q8NBB4 408 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 STARD8Q92502 1023 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 MIEF2Q96C03 454 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 SLC45A3Q96JT2 553 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 SLC26A1Q9H2B4 701 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 WDR54Q9H977 334 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 NMRK1Q9NWW6 199 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 TCFL5Q9UL49 500 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 SLC12A4Q9UP95 1085 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 SSUH2Q9Y2M2 353 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 PTRH2Q9Y3E5 179 aaKnown RBP21.1■□□□□ 0.97
LRRK1-208ENST00000532029 MRPS18BQ9Y676 258 aaKnown RBP21.1■□□□□ 0.97
LRRK1-208ENST00000532029 APC2O95996 2303 aa21.1■□□□□ 0.97
LRRK1-208ENST00000532029 FRYQ5TBA9 3013 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 ZNF891A8MT65 544 aaPredicted RBP21.09■□□□□ 0.97
LRRK1-208ENST00000532029 DYNC1I1O14576 645 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 B3GALT2O43825 422 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 HSD3B1P14060 373 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 HSD3B2P26439 372 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 SSR2P43308 183 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 HTR6P50406 440 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 RPS18P62269 152 aaKnown RBP21.09■□□□□ 0.97
LRRK1-208ENST00000532029 CSTF3Q12996 717 aaKnown RBP21.09■□□□□ 0.97
LRRK1-208ENST00000532029 STX3Q13277 289 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 NKG7Q16617 165 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 SYT16Q17RD7 645 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 FAM219BQ5XKK7 198 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 GBP7Q8N8V2 638 aaPredicted RBP21.09■□□□□ 0.97
LRRK1-208ENST00000532029 OR51Q1Q8NH59 317 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 STT3BQ8TCJ2 826 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 QRFPRQ96P65 431 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 SERINC2Q96SA4 455 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 HBEGFQ99075 208 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 BRF2Q9HAW0 419 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 TNFRSF12AQ9NP84 129 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 C14orf105Q9NVL8 296 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 AHSPQ9NZD4 102 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 FIS1Q9Y3D6 152 aa21.09■□□□□ 0.97
LRRK1-208ENST00000532029 SRRM3A6NNA2 597 aaPredicted RBP21.08■□□□□ 0.97
LRRK1-208ENST00000532029 RTCAO00442 366 aaKnown RBP21.08■□□□□ 0.97
LRRK1-208ENST00000532029 CHST10O43529 356 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 SEMA3DO95025 777 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 SNUPNO95149 360 aaKnown RBP21.08■□□□□ 0.97
LRRK1-208ENST00000532029 ETHE1O95571 254 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 CHEK2O96017 543 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 SERPINB3P29508 390 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 ARFIP1P53367 373 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 TMPRSS3P57727 454 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 ABCE1P61221 599 aaKnown RBP21.08■□□□□ 0.97
LRRK1-208ENST00000532029 OLR1P78380 273 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 MC1RQ01726 317 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 CLEC6AQ6EIG7 209 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 OR4C11Q6IEV9 310 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 UBE3DQ7Z6J8 389 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 PRSS58Q8IYP2 241 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 OR5T3Q8NGG3 340 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 OR2Y1Q8NGV0 311 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 NPLQ9BXD5 320 aaPredicted RBP21.08■□□□□ 0.97
LRRK1-208ENST00000532029 PRDM7Q9NQW5 492 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 TRAF6Q9Y4K3 522 aa21.08■□□□□ 0.97
LRRK1-208ENST00000532029 WDFY3Q8IZQ1 3526 aa21.08■□□□□ 0.96
LRRK1-208ENST00000532029 IGLV3-12A0A075B6K2 115 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 PLPP1O14494 284 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 EFSO43281 561 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 CNOT3O75175 753 aaKnown RBP21.07■□□□□ 0.96
LRRK1-208ENST00000532029 CREG1O75629 220 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 ZGLP1P0C6A0 271 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 IL10P22301 178 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 CERS1P27544 350 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 TSFMP43897 325 aaKnown RBP21.07■□□□□ 0.96
LRRK1-208ENST00000532029 XCR1P46094 333 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 SLC1A6P48664 564 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 ABRAXAS2Q15018 415 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 VWA2Q5GFL6 755 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 SH2D4BQ5SQS7 431 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 ATG16L1Q676U5 607 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 SCIMPQ6UWF3 145 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 CLYBLQ8N0X4 340 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 RAB3IL1Q8TBN0 382 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 AGR3Q8TD06 166 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 PEX11GQ96HA9 241 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 TGIF2Q9GZN2 237 aa21.07■□□□□ 0.96
LRRK1-208ENST00000532029 SOX17Q9H6I2 414 aaPredicted RBP21.07■□□□□ 0.96
LRRK1-208ENST00000532029 MAP1BP46821 2468 aaKnown RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 VSTM2BA6NLU5 285 aa21.06■□□□□ 0.96
LRRK1-208ENST00000532029 PSMD12O00232 456 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 LYPLA1O75608 230 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 KLF7O75840 302 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 FGF4P08620 206 aa21.06■□□□□ 0.96
LRRK1-208ENST00000532029 RNH1P13489 461 aaKnown RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 WT1P19544 449 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 NR1D1P20393 614 aa21.06■□□□□ 0.96
LRRK1-208ENST00000532029 HIST1H1TP22492 207 aaPredicted RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 ATP5A1P25705 553 aaKnown RBP21.06■□□□□ 0.96
LRRK1-208ENST00000532029 ARRB2P32121 409 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms