RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 B5MCH6 92 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 C9orf172C9J069 976 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 GOLGA8RI6L899 631 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RAD51BO15315 384 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 KDELR3O43731 214 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RNF8O76064 485 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ALX3O95076 343 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 FTH1P02794 183 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 JUNP05412 331 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ITGAMP11215 1152 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 GNSP15586 552 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 AMD1P17707 334 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CCNOP22674 350 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 MPZP25189 248 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 NUMBP49757 651 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CCL11P51671 97 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TUBA4AP68366 448 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 PRKCQQ04759 706 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ILKQ13418 452 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 EXT1Q16394 746 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CTU2Q2VPK5 515 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 LACTB2Q53H82 288 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CMPK2Q5EBM0 449 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CDKL4Q5MAI5 379 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TSTD2Q5T7W7 516 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 KRT40Q6A162 431 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 SNRNP48Q6IEG0 339 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 C1orf94Q6P1W5 598 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RNASEKQ6P5S7 137 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 KYAT3Q6YP21 454 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 USP50Q70EL3 339 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RD3Q7Z3Z2 195 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RBM45Q8IUH3 476 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CNGA4Q8IV77 575 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TMEM130Q8N3G9 435 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 OR13C9Q8NGT0 318 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 FANK1Q8TC84 345 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TMEM170AQ8WVE7 144 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ATG4AQ8WYN0 398 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 LPAR1Q92633 364 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 HAS2Q92819 552 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 GGHQ92820 318 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ZNF514Q96K75 400 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CASD1Q96PB1 797 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ACOX2Q99424 681 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CINPQ9BW66 212 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CEP41Q9BYV8 373 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 BCAS3Q9H6U6 928 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 SFXN1Q9H9B4 322 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 Q9N2J8 555 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 DNAJC4Q9NNZ3 241 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RAB18Q9NP72 206 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 NT5MQ9NPB1 228 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 DPP3Q9NY33 737 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CCNL1Q9UK58 526 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ICKQ9UPZ9 632 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TRPM1Q7Z4N2 1603 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ANKRD50Q9ULJ7 1429 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 GPR171O14626 319 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 YY2O15391 372 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ERN1O75460 977 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CCNB2O95067 398 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CPNE6O95741 557 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CHRNGP07510 517 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 VSIG10L2P0DP72 767 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 BMP3P12645 472 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 POLR2CP19387 275 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 HOXA9P31269 272 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CSNK1G2P78368 415 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RAE1P78406 368 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CDK3Q00526 305 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 DSC1Q08554 894 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TROAPQ12815 778 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 BMT2Q1RMZ1 405 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 UGT3A2Q3SY77 523 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 EOGTQ5NDL2 527 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 C20orf194Q5TEA3 1177 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ZNF470Q6ECI4 717 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 PRR27Q6MZM9 219 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 SLC39A4Q6P5W5 647 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 PAOXQ6QHF9 649 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ITPRIPQ8IWB1 547 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CADM3Q8N126 398 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ADPRHL1Q8NDY3 354 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 GLG1Q92896 1179 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 FAM46AQ96IP4 442 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 VPS35Q96QK1 796 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TMEM175Q9BSA9 504 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 HINT2Q9BX68 163 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 TEKT3Q9BXF9 490 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 NLNQ9BYT8 704 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 SEMA4CQ9C0C4 833 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RAB1BQ9H0U4 201 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 OPN3Q9H1Y3 402 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CSNK1G1Q9HCP0 422 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 CLEC5AQ9NY25 188 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RBAKQ9NYW8 714 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 ADAM28Q9UKQ2 775 aa4.96□□□□□ -1.62
ECHDC1-222ENST00000531967 RASD1Q9Y272 281 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms