RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MARVELD2Q8N4S9 558 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 APCDD1LQ8NCL9 501 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 GABPB2Q8TAK5 448 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 FAM57AQ8TBR7 257 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 CHTF18Q8WVB6 975 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 C14orf79Q96F83 325 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 SMIM10Q96HG1 83 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 ENKD1Q9H0I2 346 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 KLF13Q9Y2Y9 288 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 DYRK1BQ9Y463 629 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 JRKLQ9Y4A0 524 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 ITPR3Q14573 2671 aa17.2■□□□□ 0.34
SSSCA1-206ENST00000531405 A0A0G2JN53 185 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 DNALI1O14645 258 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 PEX1O43933 1283 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 ENO2P09104 434 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 PPP2R1BP30154 601 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 PPP1R3AQ16821 1122 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CMPK2Q5EBM0 449 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 TRMT10BQ6PF06 316 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 NXPE4Q6UWF7 544 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CEP128Q6ZU80 1094 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CDH24Q86UP0 819 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CYP4Z2PQ8N1L4 340 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 ARMC10Q8N2F6 343 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 POGLUT1Q8NBL1 392 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 ACBD4Q8NC06 268 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 TRPV3Q8NET8 790 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 B3GNT7Q8NFL0 401 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CREB3L4Q8TEY5 395 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 NAP1L3Q99457 506 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 AIF1LQ9BQI0 150 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 PELI2Q9HAT8 420 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 PNO1Q9NRX1 252 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 COQ3Q9NZJ6 369 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 ZNF223Q9UK11 482 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 FBXW2Q9UKT8 454 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 SLC22A14Q9Y267 594 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 VWA7Q9Y334 891 aa17.19■□□□□ 0.34
SSSCA1-206ENST00000531405 NCKAP5O14513 1909 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 URADA6NGE7 173 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 KLRC4-KLRK1H3BQV0 150 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 TGFBR3LH3BV60 316 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 CDC7O00311 574 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 ITGA10O75578 1167 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 PDE9AO76083 593 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 TFEBP19484 476 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 FNTAP49354 379 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 CLCN2P51788 898 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 BTN3A2P78410 334 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 TESK1Q15569 626 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 FAM45BPQ6NSW5 357 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 C16orf47Q6ZP98 133 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 GALNT7Q86SF2 657 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 EID3Q8N140 333 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 TMEM156Q8N614 296 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 ARMC2Q8NEN0 867 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 FAM45AQ8TCE6 357 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 SREK1Q8WXA9 508 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 PWWP2AQ96N64 755 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 LIN28AQ9H9Z2 209 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 MCCC2Q9HCC0 563 aa17.18■□□□□ 0.34
SSSCA1-206ENST00000531405 ARHGAP21Q5T5U3 1957 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 PRKNO60260 465 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 SERPINA6P08185 405 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 CAPN3P20807 821 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 SAT1P21673 171 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 HNRNPFP52597 415 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 RUNX2Q13950 521 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 ZNF460Q14592 562 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 C18orf21Q32NC0 220 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 RPRMLQ8N4K4 120 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 TMEM52Q8NDY8 209 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 OR52N2Q8NGI0 321 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 C16orf52Q8NHV5 167 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 NCLNQ969V3 563 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 OSBPL9Q96SU4 736 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 TREX2Q9BQ50 279 aaPredicted RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 WDR83Q9BRX9 315 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 NAT9Q9BTE0 207 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 DDX47Q9H0S4 455 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 CLK4Q9HAZ1 481 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 FREM3P0C091 2139 aa17.17■□□□□ 0.34
SSSCA1-206ENST00000531405 GOLGA6L10A0A0M3HER8 536 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 NKX2-6A6NCS4 301 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 FAM90A27PA6NNH2 459 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 ZNF37AP17032 561 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 HNRNPH1P31943 449 aaKnown RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 ELK3P41970 407 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 SCUBE1Q8IWY4 988 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 ZFP62Q8NB50 900 aaPredicted RBP17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 ACTRT1Q8TDG2 376 aa17.16■□□□□ 0.34
SSSCA1-206ENST00000531405 VMP1Q96GC9 406 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms