RNA–Protein interactions for RNA: ENST00000529693.1

PUF60-214, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 684 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-214ENST00000529693 RAXQ9Y2V3 346 aa16.52■□□□□ 0.24
PUF60-214ENST00000529693 DNAJC15Q9Y5T4 150 aa16.52■□□□□ 0.24
PUF60-214ENST00000529693 ACACBO00763 2458 aa16.52■□□□□ 0.23
PUF60-214ENST00000529693 SERTM1A2A2V5 107 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 WT1P19544 449 aaPredicted RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 CERS1P27544 350 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 BSGP35613 385 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 DLSTP36957 453 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 HMGCS1Q01581 520 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 DNASE1L3Q13609 305 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 RUNX2Q13950 521 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 DSG2Q14126 1118 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 ARHGAP40Q5TG30 622 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 FAM69BQ5VUD6 431 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 MLIPQ5VWP3 458 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 MRPL14Q6P1L8 145 aaKnown RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 OVCH1Q7RTY7 1134 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 TRIM42Q8IWZ5 723 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 RGMAQ96B86 450 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 TBCDQ9BTW9 1192 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 MRPL1Q9BYD6 325 aaKnown RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 WDR70Q9NW82 654 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 HAO1Q9UJM8 370 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 RAP2CQ9Y3L5 183 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 CCL27Q9Y4X3 112 aa16.51■□□□□ 0.23
PUF60-214ENST00000529693 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
PUF60-214ENST00000529693 KLF11O14901 512 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 KLK10O43240 276 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 CHST10O43529 356 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 EEDO75530 441 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 HSD3B1P14060 373 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 LIFP15018 202 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 HSD3B2P26439 372 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 RAP1GDS1P52306 607 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 RPS18P62269 152 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 OCRLQ01968 901 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 ZNF33BQ06732 778 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 TBL3Q12788 808 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 NCF4Q15080 339 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 OR4C11Q6IEV9 310 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 TRIM46Q7Z4K8 759 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 ENDOVQ8N8Q3 282 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 KDF1Q8NAX2 398 aaPredicted RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 SRFBP1Q8NEF9 429 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 CKAP2Q8WWK9 683 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 FAR2Q96K12 515 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 DCBLD2Q96PD2 775 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 DPH1Q9BZG8 443 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 ILKAPQ9H0C8 392 aaPredicted RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 PNPOQ9NVS9 261 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 TRPC4Q9UBN4 977 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 SSUH2Q9Y2M2 353 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 MAP4K5Q9Y4K4 846 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 MRPS18BQ9Y676 258 aaKnown RBP16.5■□□□□ 0.23
PUF60-214ENST00000529693 CROCCQ5TZA2 2017 aa16.5■□□□□ 0.23
PUF60-214ENST00000529693 IGLV3-12A0A075B6K2 115 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 TMEM8BA6NDV4 472 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 C9J4A7 227 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 EFSO43281 561 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 JRKO75564 520 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 SEMA3DO95025 777 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 SCELO95171 688 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 RAB40ALP0C0E4 278 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 PIM1P11309 404 aaPredicted RBP16.49■□□□□ 0.23
PUF60-214ENST00000529693 SSR2P43308 183 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 MTTPP55157 894 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 TGM3Q08188 693 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 NKG7Q16617 165 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 VWA2Q5GFL6 755 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 SPACA3Q8IXA5 215 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 CA13Q8N1Q1 262 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 METTL4Q8N3J2 472 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 GBP7Q8N8V2 638 aaPredicted RBP16.49■□□□□ 0.23
PUF60-214ENST00000529693 ACOT4Q8N9L9 421 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 OR2T11Q8NH01 316 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 OR51Q1Q8NH59 317 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 TWIST2Q8WVJ9 160 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 FKBP10Q96AY3 582 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 SERINC2Q96SA4 455 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 YIPF2Q9BWQ6 316 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 SLC26A1Q9H2B4 701 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 GPN2Q9H9Y4 310 aaPredicted RBP16.49■□□□□ 0.23
PUF60-214ENST00000529693 THAP1Q9NVV9 213 aa16.49■□□□□ 0.23
PUF60-214ENST00000529693 FARSAQ9Y285 508 aaKnown RBP16.49■□□□□ 0.23
PUF60-214ENST00000529693 ANKRD11Q6UB99 2663 aaPredicted RBP16.49■□□□□ 0.23
PUF60-214ENST00000529693 CELSR3Q9NYQ7 3312 aa16.48■□□□□ 0.23
PUF60-214ENST00000529693 VSTM2BA6NLU5 285 aa16.48■□□□□ 0.23
PUF60-214ENST00000529693 C21orf140B9A014 251 aa16.48■□□□□ 0.23
PUF60-214ENST00000529693 PIP5K1BO14986 540 aa16.48■□□□□ 0.23
PUF60-214ENST00000529693 SKAP2O75563 359 aaPredicted RBP16.48■□□□□ 0.23
PUF60-214ENST00000529693 KLF7O75840 302 aaPredicted RBP16.48■□□□□ 0.23
PUF60-214ENST00000529693 SNUPNO95149 360 aaKnown RBP16.48■□□□□ 0.23
PUF60-214ENST00000529693 ALBP02768 609 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms