RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SPATC1Q76KD6 591 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PARS2Q7L3T8 475 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PRSS48Q7RTY5 328 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 GPR155Q7Z3F1 870 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 C12orf40Q86WS4 652 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 GALNT13Q8IUC8 556 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PPCDCQ96CD2 204 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ITPAQ9BY32 194 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 CPEB1Q9BZB8 566 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SPHK2Q9NRA0 654 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 TM7SF3Q9NS93 570 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 IMPAD1Q9NX62 359 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PPIL1Q9Y3C6 166 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MICAL3Q7RTP6 2002 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 HELZP42694 1942 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PLXND1Q9Y4D7 1925 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 FEZF1A0PJY2 475 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 TRIM43BA6NCK2 446 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SSX4O60224 188 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 KLHL18O94889 574 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 DLGAP3O95886 979 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SERPIND1P05546 499 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ALPPL2P10696 532 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SERPINB10P48595 397 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 LSM11P83369 360 aaKnown RBP eCLIP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SP140Q13342 867 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MPP7Q5T2T1 576 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 GCNT6Q5T4J0 391 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 RAET1GQ6H3X3 334 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 METTL2BQ6P1Q9 378 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 LIPIQ6XZB0 460 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SLC39A5Q6ZMH5 540 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 RNF165Q6ZSG1 346 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ZNF605Q86T29 641 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 FAM9CQ8IZT9 166 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ELMOD1Q8N336 334 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 SVOPQ8N4V2 548 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 ZNF675Q8TD23 568 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 C16orf78Q8WTQ4 265 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 HRASLS5Q96KN8 279 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 FAM129BQ96TA1 746 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MROQ9BYG7 248 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 WDR12Q9GZL7 423 aaKnown RBP7.14□□□□□ -1.27
C11orf54-207ENST00000528288 MARCH7Q9H992 704 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 GIN1Q9NXP7 522 aa7.14□□□□□ -1.27
C11orf54-207ENST00000528288 PIPSLA2A3N6 862 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PPM1DO15297 605 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 LATO43561 262 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 APOL3O95236 402 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 C1orf105O95561 183 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 GASTP01350 101 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 CYP2A6P11509 494 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 ALOX12P18054 663 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 IL1RNP18510 177 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PSMB5P28074 263 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 CD40LGP29965 261 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 CDK6Q00534 326 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 HSPB3Q12988 150 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 ARMCX4Q5H9R4 360 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 HEATR4Q86WZ0 1026 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 CHCHD4Q8N4Q1 142 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 DNAJC22Q8N4W6 341 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 Q8N9G6 341 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 POC5Q8NA72 575 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 AQP11Q8NBQ7 271 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 C11orf24Q96F05 449 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 FOPNLQ96NB1 174 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 LRRC3BQ96PB8 259 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 RSPO3Q9BXY4 272 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 REEP4Q9H6H4 257 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 EXOSC4Q9NPD3 245 aaKnown RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 NECTIN3Q9NQS3 549 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 TDP1Q9NUW8 608 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 IL36AQ9UHA7 158 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PSORS1C1Q9UIG5 152 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 NOTCH4Q99466 2003 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 TRBC2A0A5B9 178 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 SLC5A10A0PJK1 596 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 ANKDD1BA6NHY2 528 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 H0YIV9 168 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 WWP2O00308 870 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 ARHGEF15O94989 841 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PTNP21246 168 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 GGT2P36268 569 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 TPTEP56180 551 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 IFI44LQ53G44 452 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 FAM83HQ6ZRV2 1179 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 RBM12BQ8IXT5 1001 aaKnown RBP7.13□□□□□ -1.27
C11orf54-207ENST00000528288 SLAIN1Q8ND83 568 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 B3GNT7Q8NFL0 401 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 OR5AR1Q8NGP9 310 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 SLC38A4Q969I6 547 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 MRGPRX3Q96LB0 322 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 SLC6A16Q9GZN6 736 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 C14orf119Q9NWQ9 140 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 PCDHGB1Q9Y5G3 927 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 TRBV4-1A0A0J9YWV2 114 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 DSCR3O14972 297 aa7.13□□□□□ -1.27
C11orf54-207ENST00000528288 SLC16A5O15375 505 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms