RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 POP5Q969H6 163 aaKnown RBP19.74■□□□□ 0.75
VPS28-209ENST00000528142 TPSD1Q9BZJ3 242 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 Q9H521 79 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 SYNPO2LQ9H987 977 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 CORO2BQ9UQ03 480 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 SLCO1B1Q9Y6L6 691 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 PPM1DO15297 605 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 PRSS23O95084 383 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 SERPINA1P01009 418 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 THEGLP0DJG4 465 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 GSTM5P46439 218 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 MVDP53602 400 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 UBXN2BQ14CS0 331 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 RGNQ15493 299 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 PRRT3Q5FWE3 981 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 C6orf52Q5T4I8 152 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 CBR4Q8N4T8 237 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 AMER3Q8N944 861 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 MFSD9Q8NBP5 474 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 ZFPM2Q8WW38 1151 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 TEFMQ96QE5 360 aaKnown RBP19.74■□□□□ 0.75
VPS28-209ENST00000528142 C9orf16Q9BUW7 83 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 SPATA9Q9BWV2 254 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 KLHL31Q9H511 634 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 NTN4Q9HB63 628 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 CD320Q9NPF0 282 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 MIEF1Q9NQG6 463 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 OAZ3Q9UMX2 235 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 PCDHGB4Q9UN71 923 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 KLHL20Q9Y2M5 609 aa19.74■□□□□ 0.75
VPS28-209ENST00000528142 A0A0A6YYD5 115 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 FAM170BA6NMN3 283 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 CLOCKO15516 846 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 SERPIND1P05546 499 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 LYNP07948 512 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 UBTFL6P0CB48 400 aaPredicted RBP19.73■□□□□ 0.75
VPS28-209ENST00000528142 C16orf72Q14CZ0 275 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 PDK3Q15120 406 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 TMTC4Q5T4D3 741 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 PAQR7Q86WK9 346 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 DPH2Q9BQC3 489 aaPredicted RBP19.73■□□□□ 0.75
VPS28-209ENST00000528142 GSDMCQ9BYG8 508 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 FOXQ1Q9C009 403 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 CHRDQ9H2X0 955 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 MAGIXQ9H6Y5 334 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 GPATCH2Q9NW75 528 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 THEGQ9P2T0 379 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 WNT16Q9UBV4 365 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 ZNF639Q9UID6 485 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 PCDHGA4Q9Y5G9 962 aa19.73■□□□□ 0.75
VPS28-209ENST00000528142 VCANP13611 3396 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 A0A1W2PRB8 838 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 PDLIM1O00151 329 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 UPK1AO00322 258 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 PLA2G16P53816 162 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 TRA2BP62995 288 aaKnown RBP19.72■□□□□ 0.75
VPS28-209ENST00000528142 KIR2DS3Q14952 304 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 HEPACAMQ14CZ8 416 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 ZNF542PQ5EBM4 170 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.72■□□□□ 0.75
VPS28-209ENST00000528142 TBC1D19Q8N5T2 526 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 SLC22A18Q96BI1 424 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 MS4A6EQ96DS6 147 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 SLC47A1Q96FL8 570 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 ZNF764Q96H86 408 aaPredicted RBP19.72■□□□□ 0.75
VPS28-209ENST00000528142 BDH2Q9BUT1 245 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 YY1AP1Q9H869 796 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 TAS2R9Q9NYW1 312 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 LRP4O75096 1905 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 RASAL1O95294 804 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 CELA2BP08218 269 aaPredicted RBP19.72■□□□□ 0.75
VPS28-209ENST00000528142 NUDT7P0C024 238 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 VEZF1Q14119 521 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 GPR18Q14330 331 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 UGT2A3Q6UWM9 527 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 ZNF793Q6ZN11 406 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 EID3Q8N140 333 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 MFSD2AQ8NA29 543 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 PATE1Q8WXA2 126 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 OR2A14Q96R47 310 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 MACROD1Q9BQ69 325 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 C17orf62Q9BQA9 187 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 SLC35A5Q9BS91 424 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 OSBPL11Q9BXB4 747 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 ABCG4Q9H172 646 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 C8orf4Q9NR00 106 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 UBAP1Q9NZ09 502 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 UTS2RQ9UKP6 389 aa19.72■□□□□ 0.75
VPS28-209ENST00000528142 PLXND1Q9Y4D7 1925 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 C4orf51C9J302 202 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 DLGAP1O14490 977 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 STATHP02808 62 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 NTRK1P04629 796 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 ARFIP1P53367 373 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 UBE2IP63279 158 aaKnown RBP19.71■□□□□ 0.75
VPS28-209ENST00000528142 NHSL2Q5HYW2 709 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.71■□□□□ 0.75
VPS28-209ENST00000528142 TMEM154Q6P9G4 183 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 NAGSQ8N159 534 aa19.71■□□□□ 0.75
VPS28-209ENST00000528142 NATD1Q8N6N6 113 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms