RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR51Q1Q8NH59 317 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 NT5CQ8TCD5 201 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 PYROXD1Q8WU10 500 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 NRGNQ92686 78 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 ALKBH8Q96BT7 664 aaKnown RBP9.88□□□□□ -0.83
CPSF1-203ENST00000527916 PYCR2Q96C36 320 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 SCMH1Q96GD3 660 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 SIGLEC12Q96PQ1 595 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 OR1F2PQ96R84 312 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 VN1R1Q9GZP7 353 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 RHOJQ9H4E5 214 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
CPSF1-203ENST00000527916 C19orf25Q9UFG5 118 aaPredicted RBP9.88□□□□□ -0.83
CPSF1-203ENST00000527916 ZFP69BQ9UJL9 534 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 RPH3AQ9Y2J0 694 aaPredicted RBP9.88□□□□□ -0.83
CPSF1-203ENST00000527916 OARD1Q9Y530 152 aa9.88□□□□□ -0.83
CPSF1-203ENST00000527916 STAB1Q9NY15 2570 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 FAM95CA0A1B0GW59 222 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 URADA6NGE7 173 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 FAM90A27PA6NNH2 459 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CDK2AP1O14519 115 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 FFAR3O14843 346 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 GPR42O15529 346 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 OR1F1O43749 312 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 GUCA1CO95843 209 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 IL1RNP18510 177 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 DNASE1P24855 282 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 PTGS2P35354 604 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CD96P40200 585 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 SCTRP47872 440 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 EFNA3P52797 238 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 PGGT1BP53609 377 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 TAS2R39P59534 338 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 SKP1P63208 163 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 POU4F1Q01851 419 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 OC90Q02509 493 aaPredicted RBP9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CEBPEQ15744 281 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 BTBD16Q32M84 506 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CDKL4Q5MAI5 379 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CATSPEREQ5SY80 951 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 FCRLBQ6BAA4 426 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 SPINK14Q6IE38 97 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 H3F3CQ6NXT2 135 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 GALNTL5Q7Z4T8 443 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CPEB2Q7Z5Q1 589 aaKnown RBP9.87□□□□□ -0.83
CPSF1-203ENST00000527916 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.87□□□□□ -0.83
CPSF1-203ENST00000527916 THOC6Q86W42 341 aaKnown RBP9.87□□□□□ -0.83
CPSF1-203ENST00000527916 ZBED8Q8IZ13 594 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 TRPV3Q8NET8 790 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 MYRIPQ8NFW9 859 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 SLC5A11Q8WWX8 675 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 RND1Q92730 232 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 CDKL2Q92772 493 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 MACROD1Q9BQ69 325 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 HES7Q9BYE0 225 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 PHACTR1Q9C0D0 580 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 PELI2Q9HAT8 420 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 KCNK13Q9HB14 408 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 DLL4Q9NR61 685 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 ANKRD10Q9NXR5 420 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 IKZF3Q9UKT9 509 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 NAALAD2Q9Y3Q0 740 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 ASB1Q9Y576 335 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 KCNE2Q9Y6J6 123 aa9.87□□□□□ -0.83
CPSF1-203ENST00000527916 NKX2-6A6NCS4 301 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SGK494L7N484 410 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 CDC7O00311 574 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 GALR3O60755 368 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SEC24DO94855 1032 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 TOXO94900 526 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 TPOP07202 933 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SP1P08047 785 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SMIM10L1P0DMW3 83 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SAT1P21673 171 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 CASQ1P31415 396 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 XCR1P46094 333 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ETF1P62495 437 aaKnown RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 HSF1Q00613 529 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 CAV1Q03135 178 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 TFF3Q07654 80 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 RGS1Q08116 209 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ATRQ13535 2644 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 EXT1Q16394 746 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 MAPKAPK3Q16644 382 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 MINDY4Q4G0A6 757 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SLC25A25Q6KCM7 469 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 C3orf62Q6ZUJ4 267 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ABHD13Q7L211 337 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ANKRD37Q7Z713 158 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ADAMTSL2Q86TH1 951 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 PDSS2Q86YH6 399 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SLC5A8Q8N695 610 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ZNF740Q8NDX6 193 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 FAM57AQ8TBR7 257 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 M1APQ8TC57 530 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ANKRD49Q8WVL7 239 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms