RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PHF12Q96QT6 1004 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 CD180Q99467 661 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 C17orf62Q9BQA9 187 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 CHRNA10Q9GZZ6 450 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 KLHL31Q9H511 634 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 SYNPO2LQ9H987 977 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 PRDM7Q9NQW5 492 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 C1GALT1Q9NS00 363 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 SLC25A37Q9NYZ2 338 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 NLGN3Q9NZ94 848 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 VAPAQ9P0L0 249 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.52■□□□□ 0.72
SMCO4-203ENST00000526869 BTBD3Q9Y2F9 522 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 GMEB1Q9Y692 573 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 ZDBF2Q9HCK1 2354 aa19.52■□□□□ 0.72
SMCO4-203ENST00000526869 TMPRSS11DO60235 418 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 STAMBPO95630 424 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 DRD2P14416 443 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 PVRP15151 417 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 GLB1P16278 677 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 CDH3P22223 829 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 HIST1H1TP22492 207 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 ATP5A1P25705 553 aaKnown RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 GSK3BP49841 420 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 PPP1CAP62136 330 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 MS4A2Q01362 244 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 LIPEQ05469 1076 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 FXNQ16595 210 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 MRM1Q6IN84 353 aaKnown RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 ZNF793Q6ZN11 406 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 PTRH1Q86Y79 214 aaKnown RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 C19orf47Q8N9M1 422 aaKnown RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 RERGQ96A58 199 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 TRAPPC9Q96Q05 1148 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 CPPED1Q9BRF8 314 aaPredicted RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 INPP5KQ9BT40 448 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 DUSP23Q9BVJ7 150 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 ALG2Q9H553 416 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 MIEF1Q9NQG6 463 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 LYARQ9NX58 379 aaKnown RBP19.51■□□□□ 0.71
SMCO4-203ENST00000526869 EHD3Q9NZN3 535 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 SH3BP4Q9P0V3 963 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 RNF215Q9Y6U7 377 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 TMEM131Q92545 1883 aa19.51■□□□□ 0.71
SMCO4-203ENST00000526869 MDC1Q14676 2089 aaKnown RBP19.5■□□□□ 0.71
SMCO4-203ENST00000526869 A0A0J9YVX5 310 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ZSCAN9O15535 394 aaPredicted RBP19.5■□□□□ 0.71
SMCO4-203ENST00000526869 FAM58BPP0C7Q3 252 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 SP9P0CG40 484 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 SMIM10L1P0DMW3 83 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ALPPL2P10696 532 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 HTR1EP28566 365 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 SLC9A5Q14940 896 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ZNF385BQ569K4 471 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ANKRD26P1Q6NSI1 321 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ZCCHC8Q6NZY4 707 aaKnown RBP19.5■□□□□ 0.71
SMCO4-203ENST00000526869 SLC35F3Q8IY50 421 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 ACOT4Q8N9L9 421 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 FAM47BQ8NA70 645 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 GOT1L1Q8NHS2 421 aaPredicted RBP19.5■□□□□ 0.71
SMCO4-203ENST00000526869 SMIM10Q96HG1 83 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 PANX1Q96RD7 426 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 KCTD14Q9BQ13 255 aaPredicted RBP19.5■□□□□ 0.71
SMCO4-203ENST00000526869 FAIM2Q9BWQ8 316 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 TRIM15Q9C019 465 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 CAPN10Q9HC96 672 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 TAS2R7Q9NYW3 318 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 LRIT1Q9P2V4 623 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 PCDHB14Q9Y5E9 798 aa19.5■□□□□ 0.71
SMCO4-203ENST00000526869 TLCD2A6NGC4 264 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 C4orf51C9J302 202 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 H0YGG7 62 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ANP32DO95626 131 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ST6GAL1P15907 406 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ARF3P61204 181 aaPredicted RBP19.49■□□□□ 0.71
SMCO4-203ENST00000526869 PLIN5Q00G26 463 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 MC1RQ01726 317 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 CCDC6Q16204 474 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ZC3H12BQ5HYM0 836 aaKnown RBP19.49■□□□□ 0.71
SMCO4-203ENST00000526869 IRGCQ6NXR0 463 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ANKRD46Q86W74 232 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 FAM156AQ8NDB6 213 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 OR6C4Q8NGE1 309 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 UTP15Q8TED0 518 aaKnown RBP19.49■□□□□ 0.71
SMCO4-203ENST00000526869 MIEF2Q96C03 454 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 TCTN2Q96GX1 697 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 FCRL4Q96PJ5 515 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 NLNQ9BYT8 704 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 ACTR3BQ9P1U1 418 aa19.49■□□□□ 0.71
SMCO4-203ENST00000526869 TXNDC9O14530 226 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 P2RX6O15547 441 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 KRT36O76013 467 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 TCN1P20061 433 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-203ENST00000526869 ZNF10P21506 573 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-203ENST00000526869 PPIBP23284 216 aaKnown RBP19.48■□□□□ 0.71
SMCO4-203ENST00000526869 AVPR2P30518 371 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 CDKN2CP42773 168 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 MTPNP58546 118 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 AP2B1P63010 937 aa19.48■□□□□ 0.71
SMCO4-203ENST00000526869 GPLD1P80108 840 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms