RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ZNF449Q6P9G9 518 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ENPP7Q6UWV6 458 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ARMCX2Q7L311 632 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 VSIG1Q86XK7 387 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 MAML2Q8IZL2 1156 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 CCAR2Q8N163 923 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 RAB42Q8N4Z0 105 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 MAPKAPK5-AS1Q8N8E1 139 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 HCAR2Q8TDS4 363 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 PIBF1Q8WXW3 757 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 EXT2Q93063 718 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 SENP5Q96HI0 755 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 RMDN2Q96LZ7 410 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 LZTS2Q9BRK4 669 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 PITPNM3Q9BZ71 974 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 BARHL1Q9BZE3 327 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ZMYND12Q9H0C1 365 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 ALDH8A1Q9H2A2 487 aaPredicted RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 FN3KQ9H479 309 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 PDRG1Q9NUG6 133 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CYP39A1Q9NYL5 469 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 GAB2Q9UQC2 676 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 CHKBQ9Y259 395 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 MRPS28Q9Y2Q9 187 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 KCNK7Q9Y2U2 307 aa3.47□□□□□ -1.85
CD44-219ENST00000525685 MRPL11Q9Y3B7 192 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 DDX49Q9Y6V7 483 aaKnown RBP3.47□□□□□ -1.85
CD44-219ENST00000525685 MCM3APO60318 1980 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FEZF1A0PJY2 475 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 SLC22A2O15244 555 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 SNX3O60493 162 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 PFKFB2O60825 505 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 RECQL5O94762 991 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 MOCS3O95396 460 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 QDPRP09417 244 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 DARSP14868 501 aaKnown RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 PDGFRAP16234 1089 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 IFNAR1P17181 557 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 ACAT1P24752 427 aaKnown RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 PTAFRP25105 342 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 CETN2P41208 172 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 MAGEA11P43364 429 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 CAPZA1P52907 286 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 HILS1P60008 231 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 NONOQ15233 471 aaKnown RBP eCLIP3.46□□□□□ -1.86
CD44-219ENST00000525685 FAM133BQ5BKY9 247 aaKnown RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 LRRC73Q5JTD7 316 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 MFSD14CQ5VZR4 134 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 ARHGAP11AQ6P4F7 1023 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FAM47EQ6ZV65 393 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FBXO16Q8IX29 292 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 MMD2Q8IY49 270 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 DDHD1Q8NEL9 900 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 OR4C3Q8NH37 302 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 OR52N5Q8NH56 324 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 VANGL1Q8TAA9 524 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 U2AF1L4Q8WU68 220 aaKnown RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 ZNF501Q96CX3 271 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 PGM2Q96G03 612 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 ZNF274Q96GC6 653 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 FAM71F1Q96KD3 344 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 FER1L6-AS2Q96M78 137 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FAM20AQ96MK3 541 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 DEFB118Q96PH6 123 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 TAAR1Q96RJ0 339 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FNBP1Q96RU3 617 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 KATNB1Q9BVA0 655 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 MTMR12Q9C0I1 747 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 P2RY12Q9H244 342 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 GSN-AS1Q9NRJ2 163 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 ZNF701Q9NV72 531 aaPredicted RBP3.46□□□□□ -1.86
CD44-219ENST00000525685 OR6C2Q9NZP2 312 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 GRID1Q9ULK0 1009 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 SNX7Q9UNH6 387 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 WDR83OSQ9Y284 106 aa3.46□□□□□ -1.86
CD44-219ENST00000525685 FRMPD4Q14CM0 1322 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 KIAA1217Q5T5P2 1943 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 ALPK3Q96L96 1907 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 IGHV4-4A0A075B6R2 117 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 A0A1W2PPW3 197 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 ESYT2A0FGR8 921 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 ASB14A6NK59 587 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 EXTL3O43909 919 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 JAK2O60674 1132 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 DFFBO76075 338 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 DEXIO95424 95 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 CTDNEP1O95476 244 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 HSPA4LO95757 839 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 CGAP01215 116 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 POLR2MP0CAP2 368 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 IGHV4-31P0DP07 118 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 SCG2P13521 617 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 CYP11B2P19099 503 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 LHCGRP22888 699 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 PSMA3P25788 255 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 PTGER4P35408 488 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 ALDH3A2P51648 485 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 NAPAP54920 295 aa3.45□□□□□ -1.86
CD44-219ENST00000525685 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms