RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TEX10Q9NXF1 929 aaPredicted RBP3.39□□□□□ -1.87
SKP1-212ENST00000523966 BARHL2Q9NY43 387 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 CACNG5Q9UF02 275 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 TMED7Q9Y3B3 224 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 SNX5Q9Y5X3 404 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 ZHX2Q9Y6X8 837 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 TARBP1Q13395 1621 aaKnown RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 ABCA5Q8WWZ7 1642 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 A0A087X0K7 114 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 ZNF732B4DXR9 585 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 RTCAO00442 366 aaKnown RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 MAGEB2O15479 319 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ARHGEF9O43307 516 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 KRT86O43790 486 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ZG16O60844 167 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 NME6O75414 186 aaPredicted RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 MTRF1O75570 445 aaKnown RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 CEACAM4O75871 244 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 CLDN1O95832 211 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 RPLP0P05388 317 aaKnown RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 EZRP15311 586 aaKnown RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 SRD5A2P31213 254 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ATP6V1E1P36543 226 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 CASP3P42574 277 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ERVK11-1P61568 191 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 CNTN1Q12860 1018 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 CEACAM7Q14002 265 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 KRT81Q14533 505 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 NHLRC1Q6VVB1 395 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 SIGLEC15Q6ZMC9 328 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 C17orf107Q6ZR85 190 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 TOM1L2Q6ZVM7 507 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 Q71RC1 249 aaPredicted RBP3.38□□□□□ -1.87
SKP1-212ENST00000523966 C5orf24Q7Z6I8 188 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 TEX26Q8N6G2 289 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ZNF614Q8N883 585 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 RPLP0P6Q8NHW5 317 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ZNF519Q8TB69 540 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ST7LQ8TDW4 575 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 GGHQ92820 318 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 PIGQQ9BRB3 760 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 MID1IP1Q9NPA3 183 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 BAIAP2L1Q9UHR4 511 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 MAD2L2Q9UI95 211 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 TEKT2Q9UIF3 430 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 ERVK-19Q9WJR5 959 aa3.38□□□□□ -1.87
SKP1-212ENST00000523966 AQRO60306 1485 aaKnown RBP eCLIP3.38□□□□□ -1.873e-6■■□□□ 13.8
SKP1-212ENST00000523966 MAGI1Q96QZ7 1491 aaPredicted RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 DDX39AO00148 427 aaKnown RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 ZNF821O75541 412 aaPredicted RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 AKAP3O75969 853 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 C4BPBP20851 252 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 STIP1P31948 543 aaKnown RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 GPR183P32249 361 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 FEN1P39748 380 aaKnown RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 ERVK-16P61578 105 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 NPRL3Q12980 569 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 RPA4Q13156 261 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 TRA2AQ13595 282 aaKnown RBP eCLIP3.37□□□□□ -1.87
SKP1-212ENST00000523966 STXBP2Q15833 593 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 AARDQ4LEZ3 155 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 SLC39A12Q504Y0 691 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 PRAMEF8Q5VWM4 474 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 LYPLAL1Q5VWZ2 237 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 KCTD11Q693B1 232 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 LCLAT1Q6UWP7 414 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 ASPGQ86U10 573 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 LRRTM1Q86UE6 522 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 TDHQ8IZJ6 230 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 SNX21Q969T3 373 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 BPIFA2Q96DR5 249 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 EEF2KMTQ96G04 330 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 C5orf30Q96GV9 206 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 CABS1Q96KC9 395 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 LURAP1Q96LR2 239 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 LINC00479Q96M42 142 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 AGAP3Q96P47 875 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 OPRPNQ99935 248 aaPredicted RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 ACAT2Q9BWD1 397 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 OSBPL8Q9BZF1 889 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 WWTR1Q9GZV5 400 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 UPF3AQ9H1J1 476 aaKnown RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 MARCH7Q9H992 704 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 KCNK13Q9HB14 408 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 MRPL17Q9NRX2 175 aaKnown RBP3.37□□□□□ -1.87
SKP1-212ENST00000523966 NLGN3Q9NZ94 848 aa3.37□□□□□ -1.87
SKP1-212ENST00000523966 FMN1Q68DA7 1419 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 EFCAB5A4FU69 1503 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 A0A0A6YYC8 382 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 I3L1I5 382 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 TFECO14948 347 aaPredicted RBP3.36□□□□□ -1.87
SKP1-212ENST00000523966 INPP4BO15327 924 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 SYT7O43581 403 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 KERAO60938 352 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 GMNNO75496 209 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 PRDM1O75626 825 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 LYNP07948 512 aa3.36□□□□□ -1.87
SKP1-212ENST00000523966 HMOX1P09601 288 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms