RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ATP5DP30049 168 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 TRPC1P48995 793 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 PPP2R2BQ00005 443 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 RELAQ04206 551 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 NAE1Q13564 534 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 XKR6Q5GH73 641 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 FAM47EQ6ZV65 393 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 TRILQ7L0X0 811 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 PCGF5Q86SE9 256 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 KRTAP1-3Q8IUG1 177 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 P3H2Q8IVL5 708 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 VSTM4Q8IW00 320 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 MFSD9Q8NBP5 474 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 RELL2Q8NC24 303 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-211ENST00000523441 GIMAP7Q8NHV1 300 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 SLC35B2Q8TB61 432 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 FAM222BQ8WU58 562 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 C1orf54Q8WWF1 131 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 YIPF4Q9BSR8 244 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 PRDM9Q9NQV7 894 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 TREX1Q9NSU2 369 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 SYBUQ9NX95 663 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 SAMD15Q9P1V8 674 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ZFATQ9P243 1243 aa10.8□□□□□ -0.68
SDCBP-211ENST00000523441 ZNF223Q9UK11 482 aaPredicted RBP10.8□□□□□ -0.68
SDCBP-211ENST00000523441 FBN1P35555 2871 aaKnown RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 FREM3P0C091 2139 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 A0A0G2JN53 185 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TCRBV16S1A1N1A0A5B0 115 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TUBAL3A6NHL2 446 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 KDM4EB2RXH2 506 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 H3BMM5 538 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 PFDN6O15212 129 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 ESR1P03372 595 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 ARNTP27540 789 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 BASP1P80723 227 aaKnown RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 BMPR2Q13873 1038 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TTLL9Q3SXZ7 439 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 Q5PR19 223 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 QSOX2Q6ZRP7 698 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 CLNKQ7Z7G1 428 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 CNGA4Q8IV77 575 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 CPNE9Q8IYJ1 553 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 FAM109AQ8N4B1 249 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 APCDD1LQ8NCL9 501 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TNIP2Q8NFZ5 429 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 LRRC46Q96FV0 321 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 VMP1Q96GC9 406 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 Q96MF0 132 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 ZDHHC11Q9H8X9 412 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 SEMA4BQ9NPR2 832 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 FBXO6Q9NRD1 293 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TUBA8Q9NY65 449 aaPredicted RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 SPRR3Q9UBC9 169 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 ADAM21Q9UKJ8 722 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 ADAMTS6Q9UKP5 1117 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 YARS2Q9Y2Z4 477 aaKnown RBP10.79□□□□□ -0.68
SDCBP-211ENST00000523441 SLC22A7Q9Y694 548 aa10.79□□□□□ -0.68
SDCBP-211ENST00000523441 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 OR14I1A6ND48 311 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 SYT5O00445 386 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 DVL2O14641 736 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 WDR1O75083 606 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 FTCDO95954 541 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 RNH1P13489 461 aaKnown RBP10.78□□□□□ -0.68
SDCBP-211ENST00000523441 SAT1P21673 171 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 HRH2P25021 359 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 ASCL1P50553 236 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 CLCN7P51798 805 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 RGS1Q08116 209 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
SDCBP-211ENST00000523441 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 AGTRAPQ6RW13 159 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 GK5Q6ZS86 529 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 PEX26Q7Z412 305 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 NAXEQ8NCW5 288 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 ASB11Q8WXH4 323 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
SDCBP-211ENST00000523441 SARAFQ96BY9 339 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 JSRP1Q96MG2 331 aaPredicted RBP10.78□□□□□ -0.68
SDCBP-211ENST00000523441 PANX2Q96RD6 677 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 GPR21Q99679 349 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 SH3GL2Q99962 352 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 FAM173AQ9BQD7 235 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 CCDC68Q9H2F9 335 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 EPB41L4BQ9H329 900 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 HOMER3Q9NSC5 361 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 BFARQ9NZS9 450 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 B4GALT7Q9UBV7 327 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 AMFRQ9UKV5 643 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
SDCBP-211ENST00000523441 CTAGE15A4D2H0 777 aa10.77□□□□□ -0.69
SDCBP-211ENST00000523441 GRID2IPA4D2P6 1211 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms