RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 DCAKDQ8WVC6 231 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 FAR2Q96K12 515 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 CNDP1Q96KN2 507 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 PTCHD1Q96NR3 888 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 QRFPRQ96P65 431 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 RHOXF2Q9BQY4 288 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 REXO4Q9GZR2 422 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 IKBKGQ9Y6K9 419 aa16.81■□□□□ 0.28
TRAPPC9-211ENST00000521700 FLNCQ14315 2725 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 TCP11X1B4DZS4 312 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 PSMD12O00232 456 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 PRMT3O60678 531 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 GFAPP14136 432 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 PLA2G16P53816 162 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 OR4D2P58180 307 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 SRSF1Q07955 248 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 NAA30Q147X3 362 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 ZNF169Q14929 603 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 SETDB1Q15047 1291 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 TLR1Q15399 786 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 KLC3Q6P597 504 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 ABHD17CQ6PCB6 329 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 PAPD4Q6PIY7 484 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 QSOX2Q6ZRP7 698 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 TEX9Q8N6V9 391 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 LRRN4CLQ8ND94 238 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 OR2L5Q8NG80 312 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 HAS2Q92819 552 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 F2RL3Q96RI0 385 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 LPAR4Q99677 370 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 NPLQ9BXD5 320 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 ZNF180Q9UJW8 692 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 RP1L1Q8IWN7 2480 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-211ENST00000521700 CLEC18AA5D8T8 446 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 LRRC14BA6NHZ5 514 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 A8MUI8 341 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TRIM49D1C9J1S8 452 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 KRT38O76015 456 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 FAM153BP0C7A2 387 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 EPB42P16452 691 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 MAOAP21397 527 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TSFMP43897 325 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 ALDH18A1P54886 795 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 ARG2P78540 354 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 PCBP2Q15366 365 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■■□ 25.7
TRAPPC9-211ENST00000521700 EXT1Q16394 746 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 FAM153CQ494X1 144 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TECRLQ5HYJ1 363 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 H3F3CQ6NXT2 135 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 MED27Q6P2C8 311 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TRIM40Q6P9F5 258 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 CLEC18BQ6UXF7 455 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TRMT10CQ7L0Y3 403 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 TAOK1Q7L7X3 1001 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 LAS2Q8IYD9 372 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 CLEC18CQ8NCF0 446 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 M1APQ8TC57 530 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 UBE2E3Q969T4 207 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 BARD1Q99728 777 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 NECTIN3Q9NQS3 549 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 PRDM9Q9NQV7 894 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 PRDM7Q9NQW5 492 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 CPSF2Q9P2I0 782 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 CPAMD8Q8IZJ3 1885 aa16.79■□□□□ 0.28
TRAPPC9-211ENST00000521700 IGKV3D-11A0A0A0MRZ8 115 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 DYTNA2CJ06 578 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 B3GALT2O43825 422 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 WDPCPO95876 746 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 F10P00742 488 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 UQCRHP07919 91 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 ABHD2P08910 425 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 CNTFP26441 200 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 GCAP28676 217 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 HPDP32754 393 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 UBAP2LQ14157 1087 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 UBE3DQ7Z6J8 389 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 OR7G3Q8NG95 312 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 OR1N1Q8NGS0 311 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 MAGEB10Q96LZ2 347 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 SERINC2Q96SA4 455 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 MS4A8Q9BY19 250 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 KCNK13Q9HB14 408 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 MMP25Q9NPA2 562 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 STMN3Q9NZ72 180 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 ANGPTL3Q9Y5C1 460 aa16.78■□□□□ 0.28
TRAPPC9-211ENST00000521700 PRRC2CQ9Y520 2896 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 A0A088AWK7 358 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 EXOC1LA0A1B0GW35 172 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 RIPK2O43353 540 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 SIX3O95343 332 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 TGFB1P01137 390 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 RBP1P09455 135 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 PCNAP12004 261 aa16.77■□□□□ 0.28
TRAPPC9-211ENST00000521700 COL6A2P12110 1019 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms