RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 FBXL4Q9UKA2 621 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 TCRBV16S1A1N1A0A5B0 115 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 CCDC151A5D8V7 595 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 B8ZZF3 427 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 SGK494L7N484 410 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 DPM1O60762 260 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 GMPRP36959 345 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 XCR1P46094 333 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 PGDP52209 483 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 TRA2BP62995 288 aaKnown RBP8.92□□□□□ -0.98
CLK4-209ENST00000521621 ASPHQ12797 758 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 CSTF3Q12996 717 aaKnown RBP8.92□□□□□ -0.98
CLK4-209ENST00000521621 ERCC6LQ2NKX8 1250 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 UNC50Q53HI1 259 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 ATP1A1-AS1Q5TC04 95 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 ANKRD37Q7Z713 158 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 KBTBD2Q8IY47 623 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 TRPC4APQ8TEL6 797 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 RGMAQ96B86 450 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 FAR2Q96K12 515 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 SCYL1Q96KG9 808 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 CENPKQ9BS16 269 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 UNKQ9C0B0 810 aaKnown RBP8.92□□□□□ -0.98
CLK4-209ENST00000521621 KLHL31Q9H511 634 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 ZBTB26Q9HCK0 441 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 MMP25Q9NPA2 562 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 OXSMQ9NWU1 459 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 KCMF1Q9P0J7 381 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 MAU2Q9Y6X3 613 aa8.92□□□□□ -0.98
CLK4-209ENST00000521621 TNRC6AQ8NDV7 1962 aaKnown RBP8.92□□□□□ -0.98
CLK4-209ENST00000521621 PTPRQQ9UMZ3 2332 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 C4orf51C9J302 202 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 CYR61O00622 381 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 C8orf89P0DMQ9 161 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 OTX2P32243 289 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 CCNG1P51959 295 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 SLC18A1P54219 525 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 SNRPNP63162 240 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 KLRB1Q12918 225 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 VWA2Q5GFL6 755 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 CRB2Q5IJ48 1285 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 PRSS41Q7RTY9 318 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 CPEB2Q7Z5Q1 589 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 CYP4X1Q8N118 509 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 GALNT16Q8N428 558 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 UHMK1Q8TAS1 419 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 METTL21AQ8WXB1 218 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 TM9SF4Q92544 642 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 PGM2Q96G03 612 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ABHD17AQ96GS6 310 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ZNF717Q9BY31 904 aaPredicted RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 SOX17Q9H6I2 414 aaPredicted RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 NOL11Q9H8H0 719 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 ACTR8Q9H981 624 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 NMRK1Q9NWW6 199 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 PHF11Q9UIL8 331 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 DAPP1Q9UN19 280 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 MRPS33Q9Y291 106 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 PLLPQ9Y342 182 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 A0A1W2PPM1 405 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ARGFXA6NJG6 315 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 SUV39H1O43463 412 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 RDH16O75452 317 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ALPPP05187 535 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 IL1RNP18510 177 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 PRPH2P23942 346 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ATP5A1P25705 553 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 PPP2R1BP30154 601 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 CLCQ05315 142 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 LCP2Q13094 533 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 FRG2Q64ET8 278 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 OR4C11Q6IEV9 310 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 RPUSD3Q6P087 351 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 HUS1BQ8NHY5 278 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 FAM76AQ8TAV0 307 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 EPS8L3Q8TE67 593 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 FRG2BQ96QU4 278 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 WDR77Q9BQA1 342 aaPredicted RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 SLC25A23Q9BV35 468 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 TRIM45Q9H8W5 580 aaPredicted RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 SNX6Q9UNH7 406 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 WBP11Q9Y2W2 641 aaKnown RBP8.91□□□□□ -0.98
CLK4-209ENST00000521621 PCDHGB6Q9Y5F9 930 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 ACACAQ13085 2346 aa8.91□□□□□ -0.98
CLK4-209ENST00000521621 A0A0A6YYD5 115 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 COPEO14579 308 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 CTNSO60931 367 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 IFI6P09912 130 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 HIST1H1TP22492 207 aaPredicted RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 EFNA3P52797 238 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 LIM2P55344 173 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 RUNX2Q13950 521 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 ZRSR2Q15696 482 aaKnown RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 INAQ16352 499 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 DEFB134Q4QY38 66 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 B3GNTL1Q67FW5 361 aaPredicted RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 ZFHX4Q86UP3 3567 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
CLK4-209ENST00000521621 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
CLK4-209ENST00000521621 OR6Y1Q8NGX8 325 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms