RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RHOUQ7L0Q8 258 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 BBS5Q8N3I7 341 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 TMEM156Q8N614 296 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PLPP5Q8NEB5 264 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 OR51Q1Q8NH59 317 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 DTX3LQ8TDB6 740 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 STARD4Q96DR4 205 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 MIPEPQ99797 713 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 G6PC3Q9BUM1 346 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 OPN3Q9H1Y3 402 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PROK2Q9HC23 129 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 LUC7LQ9NQ29 371 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 SMOXQ9NWM0 555 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 PCSK1NQ9UHG2 260 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 SMC3Q9UQE7 1217 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 ATG4BQ9Y4P1 393 aa6.14□□□□□ -1.43
CTNNA1-216ENST00000519489 DOCK7Q96N67 2140 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 TRBV11-1A0A0K0K1C0 115 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 GLYATL1P3A0A0U1RQE8 302 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2A25A4D2G3 310 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 TARM1B6A8C7 271 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 TRIM77I1YAP6 450 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 FCHO1O14526 889 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 RCBTB2O95199 551 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 LSM8O95777 96 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 ANXA5P08758 320 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 CD9P21926 228 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PTPN6P29350 595 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 IL2RGP31785 369 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 HMGCLP35914 325 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 HCAR3P49019 387 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PCYT1AP49585 367 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 NUDT6P53370 316 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 AIF1P55008 147 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 AP1B1Q10567 949 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 SF1Q15637 639 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 DIEXFQ68CQ4 756 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 VWA1Q6PCB0 445 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 CLEC2AQ6UVW9 174 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 GK5Q6ZS86 529 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 ADGRE4PQ86SQ3 457 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PDSS2Q86YH6 399 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 CILP2Q8IUL8 1156 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 RASGEF1CQ8N431 466 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 CSNK1A1LQ8N752 337 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 OR5K2Q8NHB8 316 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 GIMAP7Q8NHV1 300 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 FBF1Q8TES7 1133 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 TADA1Q96BN2 335 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 C11orf24Q96F05 449 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 BTBD9Q96Q07 612 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PCDHB18PQ96TA0 734 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 AARSD1Q9BTE6 412 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 DEFB126Q9BYW3 111 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 XPO4Q9C0E2 1151 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 BARX1Q9HBU1 254 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 ACKR4Q9NPB9 350 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 TMEFF2Q9UIK5 374 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 DNAJC12Q9UKB3 198 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PACSIN3Q9UKS6 424 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 ERVK-11Q9UQG0 969 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 ASF1AQ9Y294 204 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 SLC6A5Q9Y345 797 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 PCDHA13Q9Y5I0 950 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 NCKAP5O14513 1909 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 HERC1Q15751 4861 aa6.13□□□□□ -1.43
CTNNA1-216ENST00000519489 C15orf38-AP3S2A0A0A6YYH1 394 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 IGKV1-8A0A0C4DH67 115 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 A0A1W2PNV4 684 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 A0A1W2PPV9 198 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 KLHL33A6NCF5 533 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 SIGLEC16A6NMB1 481 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 A8MUA0 341 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MAGEB17A8MXT2 336 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 G3V4G9 280 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 SGK494L7N484 410 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 PRPF4O43172 522 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2J2O76002 312 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 AP2A1O95782 977 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 WNT11O96014 354 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 CYC1P08574 325 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 TCF4P15884 667 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 SSR4P51571 173 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MPP1Q00013 466 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 CETN1Q12798 172 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MAMLD1Q13495 774 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 PTK6Q13882 451 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 GGTLC2Q14390 218 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 ERMARDQ5T6L9 678 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MILR1Q7Z6M3 343 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 KIAA1328Q86T90 577 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 CAND1Q86VP6 1230 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 GPSM1Q86YR5 675 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 RELL1Q8IUW5 271 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 TBC1D21Q8IYX1 336 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 LRRC25Q8N386 305 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms