RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PRM3Q9NNZ6 103 aa10.18□□□□□ -0.78
PVT1-208ENST00000519481 ZNF835Q9Y2P0 537 aa10.18□□□□□ -0.78
PVT1-208ENST00000519481 MEMO1Q9Y316 297 aa10.18□□□□□ -0.78
PVT1-208ENST00000519481 PKDREJQ9NTG1 2253 aa10.18□□□□□ -0.78
PVT1-208ENST00000519481 TRBV11-1A0A0K0K1C0 115 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 ANKDD1BA6NHY2 528 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 CCDC188H7C350 402 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TFECO14948 347 aaPredicted RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 B3GALT2O43825 422 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 DNAJB6O75190 326 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 CLDN14O95500 239 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 SNRPB2P08579 225 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 SMIM10L1P0DMW3 83 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TRHRP34981 398 aaPredicted RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TGM3Q08188 693 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 PDIA2Q13087 525 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 TMIGD1Q6UXZ0 262 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 ZC3HC1Q86WB0 502 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 CA13Q8N1Q1 262 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TCAIMQ8N3R3 496 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 FBXO36Q8NEA4 188 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 B3GNT7Q8NFL0 401 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 MTFMTQ96DP5 389 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 TSPAN17Q96FV3 270 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 SMIM10Q96HG1 83 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 SEC16BQ96JE7 1060 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 PWWP2AQ96N64 755 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TRIM31Q9BZY9 425 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 PITHD1Q9GZP4 211 aaPredicted RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 RHOJQ9H4E5 214 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 KLHL31Q9H511 634 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 TRIM45Q9H8W5 580 aaPredicted RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 CNOT10Q9H9A5 744 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 COPS7BQ9H9Q2 264 aaPredicted RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 POPDC3Q9HBV1 291 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 NECTIN3Q9NQS3 549 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 PRTFDC1Q9NRG1 225 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 PNO1Q9NRX1 252 aaKnown RBP10.17□□□□□ -0.78
PVT1-208ENST00000519481 TXNDC16Q9P2K2 825 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 FBXW2Q9UKT8 454 aa10.17□□□□□ -0.78
PVT1-208ENST00000519481 IGKV3D-11A0A0A0MRZ8 115 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 EFCAB8A8MWE9 144 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 CLGNO14967 610 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 ERI3O43414 337 aaKnown RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 WISP2O76076 250 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 MYO1DO94832 1006 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SEC31AO94979 1220 aaKnown RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 HSD17B7P56937 341 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 TAS2R39P59534 338 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 HYAL2Q12891 473 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SLC13A2Q13183 592 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SLBPQ14493 270 aaKnown RBP eCLIP10.16□□□□□ -0.78
PVT1-208ENST00000519481 ZNF460Q14592 562 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 TERF2Q15554 542 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 TSNQ15631 228 aaKnown RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 TRIM40Q6P9F5 258 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SLCO4C1Q6ZQN7 724 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SIAH3Q8IW03 269 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.16□□□□□ -0.78
PVT1-208ENST00000519481 KLHDC8AQ8IYD2 350 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 CYP4Z2PQ8N1L4 340 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 CPSF7Q8N684 471 aaKnown RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 BBOF1Q8ND07 529 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 NFAM1Q8NET5 270 aaPredicted RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 CREB3L4Q8TEY5 395 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 AGAP11Q8TF27 550 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 PHF10Q8WUB8 498 aaKnown RBP10.16□□□□□ -0.78
PVT1-208ENST00000519481 CDKL2Q92772 493 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 VMP1Q96GC9 406 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 PDLIM2Q96JY6 352 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 TRIM51Q9BSJ1 452 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 NT5DC2Q9H857 520 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 PLAC1Q9HBJ0 212 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 TIMMDC1Q9NPL8 285 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 MOCS1Q9NZB8 636 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 WWOXQ9NZC7 414 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 GPRC5BQ9NZH0 403 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 COQ3Q9NZJ6 369 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 IKZF3Q9UKT9 509 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 ERVK-11Q9UQG0 969 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 PSAT1Q9Y617 370 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
PVT1-208ENST00000519481 APCP25054 2843 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 GTF3C1Q12789 2109 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 A0A0G2JN53 185 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 LRIT2A6NDA9 550 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 NCF1BA6NI72 391 aaPredicted RBP10.15□□□□□ -0.78
PVT1-208ENST00000519481 USP27XA6NNY8 438 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 NCF1CA8MVU1 366 aaPredicted RBP10.15□□□□□ -0.78
PVT1-208ENST00000519481 E9PLN8 166 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 CDC40O60508 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
PVT1-208ENST00000519481 CLEC3AO75596 197 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 ZFAND5O76080 213 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 S100BP04271 92 aaPredicted RBP10.15□□□□□ -0.78
PVT1-208ENST00000519481 IFNA16P05015 189 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 NCF1P14598 390 aaPredicted RBP10.15□□□□□ -0.78
PVT1-208ENST00000519481 SSTR2P30874 369 aa10.15□□□□□ -0.78
PVT1-208ENST00000519481 PTGS2P35354 604 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms