RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 A0A0G2JN53 185 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ERICH4A6NGS2 130 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ANKDD1BA6NHY2 528 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 A8MUI8 341 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 UBXN8O00124 270 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 CCNT2O60583 730 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 PRMT3O60678 531 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 CLEC3AO75596 197 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 F10P00742 488 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 TUBB4AP04350 444 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ECHS1P30084 290 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 HNRNPH1P31943 449 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 TSFMP43897 325 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 TNFSF10P50591 281 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 IRF9Q00978 393 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ABRAXAS2Q15018 415 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 TLR1Q15399 786 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 NR6A1Q15406 480 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 BTBD16Q32M84 506 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ADPRMQ3LIE5 342 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 GLE1Q53GS7 698 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 SFT2D3Q587I9 215 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 FHL5Q5TD97 284 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ADNP2Q6IQ32 1131 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.78□□□□□ -1
HDAC3-215ENST00000519474 CENPLQ8N0S6 344 aaPredicted RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 KRT78Q8N1N4 520 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 CA13Q8N1Q1 262 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 PLD6Q8N2A8 252 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 PRR7Q8TB68 274 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 GRHL3Q8TE85 626 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 KCTD4Q8WVF5 259 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 FAR1Q8WVX9 515 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 IFT81Q8WYA0 676 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 ZBTB9Q96C00 473 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 PITHD1Q9GZP4 211 aaPredicted RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 RHBGQ9H310 441 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 EHD1Q9H4M9 534 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 CNOT10Q9H9A5 744 aaKnown RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 MMP25Q9NPA2 562 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 NECTIN3Q9NQS3 549 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 PRDM7Q9NQW5 492 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 WWOXQ9NZC7 414 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 C19orf25Q9UFG5 118 aaPredicted RBP8.78□□□□□ -1
HDAC3-215ENST00000519474 ESPL1Q14674 2120 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 NBASA2RRP1 2371 aa8.78□□□□□ -1
HDAC3-215ENST00000519474 GCN1Q92616 2671 aaKnown RBP8.77□□□□□ -1
HDAC3-215ENST00000519474 UQCRHLA0A096LP55 91 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 DYTNA2CJ06 578 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 KLK8O60259 260 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 MAN1A2O60476 641 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 KERAO60938 352 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 WISP2O76076 250 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ALDOAP04075 364 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 UQCRHP07919 91 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CTAGE8P0CG41 777 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 RNH1P13489 461 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 TYK2P29597 1187 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CD96P40200 585 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ST13P50502 369 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 OR4D2P58180 307 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 STXBP1P61764 594 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ARG2P78540 354 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 IRF8Q02556 426 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CHIT1Q13231 466 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 BMPR2Q13873 1038 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ACAP2Q15057 778 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 TBCCQ15814 346 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 PDK4Q16654 411 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ABHD17BQ5VST6 288 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 AP1ARQ63HQ0 302 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF324BQ6AW86 544 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 FCRLBQ6BAA4 426 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ABHD17CQ6PCB6 329 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 PAPD4Q6PIY7 484 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 QSOX2Q6ZRP7 698 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 UBE3DQ7Z6J8 389 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CTAGE4Q8IX94 777 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 SNX31Q8N9S9 440 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 NFAM1Q8NET5 270 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 TTLQ8NG68 377 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 RHEBL1Q8TAI7 183 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ELP5Q8TE02 316 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 SLC44A1Q8WWI5 657 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CCT6BQ92526 530 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 PTCD3Q96EY7 689 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 SEC16BQ96JE7 1060 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CNDP1Q96KN2 507 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF354BQ96LW1 612 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 F2RL3Q96RI0 385 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 TAAR6Q96RI8 345 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 NPLQ9BXD5 320 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 RNF32Q9H0A6 362 aa8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CDC42EP4Q9H3Q1 356 aaKnown RBP8.77□□□□□ -1.01
HDAC3-215ENST00000519474 CDCP1Q9H5V8 836 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms