RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PAPOLGQ9BWT3 736 aaKnown RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 OSBPL8Q9BZF1 889 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 UPF3AQ9H1J1 476 aaKnown RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 MTIF3Q9H2K0 278 aaKnown RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 C3orf14Q9HBI5 128 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 B3GAT2Q9NPZ5 323 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 DBF4Q9UBU7 674 aaPredicted RBP4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 PSORS1C1Q9UIG5 152 aa4.3□□□□□ -1.72
HMGCS1-207ENST00000514610 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 M0R296 226 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 RNF103O00237 685 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 P2RX6O15547 441 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 CLN5O75503 358 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 GRAP2O75791 330 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 AKAP3O75969 853 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 RPLP0P05388 317 aaKnown RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SBK2P0C263 348 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 DPEP1P16444 411 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 UGT1A4P22310 534 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 OAS2P29728 719 aaKnown RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 GPR183P32249 361 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 EVCP57679 992 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC34A1Q06495 639 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 NFATC2Q13469 925 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 CEACAM7Q14002 265 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 MORF4L2Q15014 288 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 MTHFSDQ2M296 383 aaKnown RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 AARDQ4LEZ3 155 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC10A5Q5PT55 438 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 PLPP4Q5VZY2 271 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 KCTD11Q693B1 232 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 LRRTM1Q86UE6 522 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 LAX1Q8IWV1 398 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC43A2Q8N370 569 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SFRP1Q8N474 314 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 C10orf53Q8N6V4 93 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 PRSS33Q8NF86 280 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 OR9Q2Q8NGE9 314 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 RNASE8Q8TDE3 154 aaKnown RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 PRICKLE1Q96MT3 831 aaPredicted RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 TEX10Q9NXF1 929 aaPredicted RBP4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SPG21Q9NZD8 308 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 BAIAP2L1Q9UHR4 511 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 PILRAQ9UKJ1 303 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 SNED1Q8TER0 1413 aa4.29□□□□□ -1.72
HMGCS1-207ENST00000514610 RNF123Q5XPI4 1314 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 LOC105371242A0A075B767 164 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 C5orf51A6NDU8 294 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 A8MU76 341 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 H7C423 109 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 SOCS3O14543 225 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 KINO60870 393 aaKnown RBP4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 CALCAP01258 141 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 ODC1P11926 461 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 GIFP27352 417 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 OR1D2P34982 312 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 CTNNB1P35222 781 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 BACE1P56817 501 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 SLC3A1Q07837 685 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 LY6DQ14210 128 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 SGCBQ16585 318 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 FUT11Q495W5 492 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 C3P1Q6ZMU1 363 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 GDPGP1Q6ZNW5 385 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 Q8NBF4 154 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 RNF149Q8NC42 400 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 OR5M9Q8NGP3 310 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 OR13C5Q8NGS8 318 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 GTF3AQ92664 365 aaKnown RBP4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 GGHQ92820 318 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 PDLIM5Q96HC4 596 aaKnown RBP4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 AGAP4Q96P64 663 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 IWS1Q96ST2 819 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 PKP2Q99959 881 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 CCM2Q9BSQ5 444 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 NDE1Q9NXR1 346 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 MIS18AQ9NYP9 233 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 NLGN3Q9NZ94 848 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 NUDT4Q9NZJ9 180 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 THAP10Q9P2Z0 257 aaPredicted RBP4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 STX8Q9UNK0 236 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 ITM2BQ9Y287 266 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF510Q9Y2H8 683 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
HMGCS1-207ENST00000514610 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 FAM149AA5PLN7 773 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 KPNA7A9QM74 516 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 IDH3BO43837 385 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 ANGPTL1O95841 491 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 RNF224P0DH78 156 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 ACKR3P25106 362 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 COPB2P35606 906 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 CASP3P42574 277 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 TMEM50BP56557 158 aa4.27□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF177Q13360 481 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms