RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 FIGLAQ6QHK4 219 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 SPESP1Q6UW49 350 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 ZNF621Q6ZSS3 439 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 ZNF438Q7Z4V0 828 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 C17orf82Q86X59 251 aaPredicted RBP12.23□□□□□ -0.45
PVT1-203ENST00000513868 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
PVT1-203ENST00000513868 KBTBD2Q8IY47 623 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 TBC1D19Q8N5T2 526 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 TMEM102Q8N9M5 508 aaPredicted RBP12.23□□□□□ -0.45
PVT1-203ENST00000513868 GOLM1Q8NBJ4 401 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 OR2L5Q8NG80 312 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 LMX1AQ8TE12 382 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 PPCDCQ96CD2 204 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 TM4SF19Q96DZ7 209 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 QRFPRQ96P65 431 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 OR2A5Q96R48 311 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 PKP2Q99959 881 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 TRIM4Q9C037 500 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 CCM2LQ9NUG4 571 aaPredicted RBP12.23□□□□□ -0.45
PVT1-203ENST00000513868 ATAD3AQ9NVI7 634 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 HRASLS2Q9NWW9 162 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 C6orf203Q9P0P8 240 aaPredicted RBP12.23□□□□□ -0.45
PVT1-203ENST00000513868 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 AP4S1Q9Y587 144 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 MUC3AQ02505 3323 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 ADAMTS9Q9P2N4 1935 aa12.23□□□□□ -0.45
PVT1-203ENST00000513868 ARHGAP10A1A4S6 786 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 CLIC1O00299 241 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 BCAT2O15382 392 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 PRAMEF10O60809 474 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GPR37L1O60883 481 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 STAMBPO95630 424 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 CAPNS1P04632 268 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ENGP17813 658 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GPX2P18283 190 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 DDCP20711 480 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 FASLGP48023 281 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 FNTBP49356 437 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 SNRPNP63162 240 aaKnown RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 HBA1P69905 142 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TOR1AIP1Q5JTV8 583 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 LPCAT4Q643R3 524 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 PROSER1Q86XN7 944 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TICAM1Q8IUC6 712 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ADGRG5Q8IZF4 528 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ARL14Q8N4G2 192 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 FAM47BQ8NA70 645 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 VPS37AQ8NEZ2 397 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 NT5CQ8TCD5 201 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 UCN3Q969E3 161 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 CENPKQ9BS16 269 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TBCDQ9BTW9 1192 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 COPS7BQ9H9Q2 264 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 ARMC1Q9NVT9 282 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TEX10Q9NXF1 929 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 ANKMY1Q9P2S6 941 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 SPASTQ9UBP0 616 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 OR5K3A6NET4 321 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 FAM220BPB1ANY3 271 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 LMO7DNF2Z398 122 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 AQP9O43315 295 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ERI3O43414 337 aaKnown RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 FKBP9O95302 570 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 SPTBP11277 2137 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 PVRP15151 417 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 PEX2P28328 305 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GSTM5P46439 218 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.451e-6■■□□□ 14.5
PVT1-203ENST00000513868 TRA2BP62995 288 aaKnown RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 RELAQ04206 551 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 SIGLEC14Q08ET2 396 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ABHD18Q0P651 414 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 LRRC74AQ0VAA2 488 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GAB1Q13480 694 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 AASDHQ4L235 1098 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 MRM1Q6IN84 353 aaKnown RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 OGFOD3Q6PK18 319 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 DGLUCYQ7Z3D6 616 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 MICU2Q8IYU8 434 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 CLEC4FQ8N1N0 589 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 KCT2Q8NC54 265 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 BAHD1Q8TBE0 780 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 ZFP90Q8TF47 636 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 RSC1A1Q92681 617 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 KCNC2Q96PR1 638 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 KLHL25Q9H0H3 589 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 GORASP2Q9H8Y8 452 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 TPT1P8Q9HAU6 139 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 PRMT8Q9NR22 394 aaPredicted RBP12.22□□□□□ -0.45
PVT1-203ENST00000513868 UCKL1Q9NWZ5 548 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 MAGEL2Q9UJ55 1249 aa12.22□□□□□ -0.45
PVT1-203ENST00000513868 ASXL3Q9C0F0 2248 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 CCDC88CQ9P219 2028 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 ZDBF2Q9HCK1 2354 aa12.21□□□□□ -0.45
PVT1-203ENST00000513868 DHRS12A0PJE2 317 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms