RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CEACAM3P40198 252 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 PTGFRP43088 359 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 RGS7P49802 495 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 MRPL49Q13405 166 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 CCNYL2Q5T2Q4 361 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 LIPKQ5VXJ0 399 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 MFSD14CQ5VZR4 134 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 ZNF425Q6IV72 752 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 RNASEKQ6P5S7 137 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 WASH2PQ6VEQ5 465 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 TMEM173Q86WV6 379 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 TMC8Q8IU68 726 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 TMEFF1Q8IYR6 380 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 KBTBD3Q8NAB2 608 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 DNAAF1Q8NEP3 725 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 SOCS4Q8WXH5 440 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 ST8SIA2Q92186 375 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 EMG1Q92979 244 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 SCAMP4Q969E2 229 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 SLCO4A1Q96BD0 722 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 ZNF48Q96MX3 618 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 NAT9Q9BTE0 207 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 CCDC28BQ9BUN5 200 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 MRI1Q9BV20 369 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 ATG10Q9H0Y0 220 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 EBF1Q9UH73 591 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 CDC42EP3Q9UKI2 254 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 UTS2RQ9UKP6 389 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 UBE2J1Q9Y385 318 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 REXO2Q9Y3B8 237 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 STARD13Q9Y3M8 1113 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 GRIP1Q9Y3R0 1128 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 TNFRSF18Q9Y5U5 241 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 STON1Q9Y6Q2 735 aa5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 PARP4Q9UKK3 1724 aaKnown RBP5.97□□□□□ -1.45
TRAPPC11-209ENST00000512476 PRSS37A4D1T9 235 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 PRR19A6NJB7 356 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 A8MX80 341 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 PTGESO14684 152 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 KDELR3O43731 214 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 HCN1O60741 890 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 ERN1O75460 977 aaKnown RBP5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 UPP2O95045 317 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 GOT2P00505 430 aaKnown RBP5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 IFNA14P01570 189 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 HEXAP06865 529 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 SPATA31C1P0DKV0 1188 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 CPN1P15169 458 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 EZRP15311 586 aaKnown RBP5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 ZNF28P17035 718 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 IGFBP2P18065 325 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 IL12BP29460 328 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 SLC8A1P32418 973 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 SPAM1P38567 509 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 SSX2Q16385 188 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 MARCH8Q5T0T0 291 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 CNGA4Q8IV77 575 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 DCUN1D3Q8IWE4 304 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 LRRC56Q8IYG6 542 aaPredicted RBP5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 TTC9BQ8N6N2 239 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 SEMA4DQ92854 862 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 GLG1Q92896 1179 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 ASB9Q96DX5 294 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 HHIPL1Q96JK4 782 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 CRAMP1Q96RY5 1269 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 WACQ9BTA9 647 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 UBTD1Q9HAC8 227 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 AP3M1Q9Y2T2 418 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 PKP3Q9Y446 797 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 CACNG2Q9Y698 323 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 U3KQE9 123 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 KDM3BQ7LBC6 1761 aa5.96□□□□□ -1.45
TRAPPC11-209ENST00000512476 LOC390937A0A1W2PQ73 354 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 OGG1O15527 345 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 WIPF1O43516 503 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 ITGB3P05106 788 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 MSR1P21757 451 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 NMBRP28336 390 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 CDAP32320 146 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 RGRP47804 291 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 SLC9A3P48764 834 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 MLF1P58340 268 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 SEMA3BQ13214 749 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 STX3Q13277 289 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 ALKBH1Q13686 389 aaKnown RBP5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 ITIH4Q14624 930 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 STILQ15468 1287 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 ABHD17BQ5VST6 288 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 OR5M10Q6IEU7 315 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 LRRC74BQ6ZQY2 392 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 DET1Q7L5Y6 550 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 RD3Q7Z3Z2 195 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 ABHD12BQ7Z5M8 362 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 CCDC60Q8IWA6 550 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 CCDC36Q8IYA8 594 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 FAM58AQ8N1B3 248 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 PARP8Q8N3A8 854 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 TBC1D19Q8N5T2 526 aa5.96□□□□□ -1.46
TRAPPC11-209ENST00000512476 NETO2Q8NC67 525 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms