RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SF3A3Q12874 501 aaKnown RBP eCLIP10□□□□□ -0.81
PDLIM5-217ENST00000512274 ABRQ12979 859 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 CSTF3Q12996 717 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 TESK1Q15569 626 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 UGT8Q16880 541 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 PDCD4Q53EL6 469 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 ATG9BQ674R7 924 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 GRHL2Q6ISB3 625 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 FAM199XQ6PEV8 388 aaPredicted RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 CRTC3Q6UUV7 619 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 LCTLQ6UWM7 567 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 HACD2Q6Y1H2 254 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ZNF517Q6ZMY9 492 aaPredicted RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 MBOAT1Q6ZNC8 495 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 THOC6Q86W42 341 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 CDYL2Q8N8U2 506 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ATP6V1E2Q96A05 226 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ESAMQ96AP7 390 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 FCRL1Q96LA6 429 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 OR6C1Q96RD1 312 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 HAUS8Q9BT25 410 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 EFCAB11Q9BUY7 163 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 SHCBP1LQ9BZQ2 653 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 AKIRIN1Q9H9L7 192 aaPredicted RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 BRF2Q9HAW0 419 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 INTS7Q9NVH2 962 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 AIG1Q9NVV5 245 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 SIRT5Q9NXA8 310 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 TAS2R1Q9NYW7 299 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ZIM2Q9NZV7 527 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ARMCX1Q9P291 453 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 PADI1Q9ULC6 663 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ASF1AQ9Y294 204 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 PCNX1Q96RV3 2341 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 MANBAO00462 879 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 LSM1O15116 133 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 RGS14O43566 566 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 FKBP9O95302 570 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 COX4I1P13073 169 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 NQO1P15559 274 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 TSPAN8P19075 237 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 GSTM2P28161 218 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SERPINB1P30740 379 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 GDF5P43026 501 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SEPHS1P49903 392 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 C21orf58P58505 322 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 STX5Q13190 355 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 RIPK1Q13546 671 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 LAPTM5Q13571 262 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 IL10RAQ13651 578 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 C18orf21Q32NC0 220 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 C6orf136Q5SQH8 315 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 FRG2Q64ET8 278 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 WDR74Q6RFH5 385 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SPNS3Q6ZMD2 512 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 FJX1Q86VR8 437 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 LAS2Q8IYD9 372 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 ARHGAP24Q8N264 748 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 RAB42Q8N4Z0 105 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 CFAP61Q8NHU2 1237 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 WDR20Q8TBZ3 569 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC37A2Q8TED4 501 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 THAP4Q8WY91 577 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SMPDL3AQ92484 453 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 UBE2E3Q969T4 207 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 TUBGCP3Q96CW5 907 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 REPS1Q96D71 796 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 C11orf24Q96F05 449 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 FRG2BQ96QU4 278 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 OR4K3Q96R72 315 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 KCNA7Q96RP8 456 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SARGQ9BW04 601 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 KIR3DX1Q9H7L2 352 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 ACTR8Q9H981 624 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 LHX9Q9NQ69 397 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 CCDC177Q9NQR7 707 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SIDT1Q9NXL6 827 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 FAM8A1Q9UBU6 413 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 ZNHIT2Q9UHR6 403 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 ADGRE2Q9UHX3 823 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC22A14Q9Y267 594 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 NTNG1Q9Y2I2 539 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 GPR45Q9Y5Y3 372 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 CSMD2Q7Z408 3487 aa9.99□□□□□ -0.81
PDLIM5-217ENST00000512274 CELSR1Q9NYQ6 3014 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 OR5K4A6NMS3 321 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 PSMD12O00232 456 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 FOXE1O00358 373 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 CLGNO14967 610 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 PRAMEF4O60810 478 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 RASSF9O75901 435 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 RECKO95980 971 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 NPPAP01160 153 aa9.98□□□□□ -0.81
PDLIM5-217ENST00000512274 ALDOCP09972 364 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms