RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 OR1N1Q8NGS0 311 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 UBTD2Q8WUN7 234 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 DCAKDQ8WVC6 231 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 PTCHD1Q96NR3 888 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 QRFPRQ96P65 431 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 F2RL3Q96RI0 385 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 NT5DC2Q9H857 520 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 NECTIN3Q9NQS3 549 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 COPG2Q9UBF2 871 aa12.49□□□□□ -0.41
RNF4-215ENST00000511843 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
RNF4-215ENST00000511843 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 K7EPI3 171 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 PSMD12O00232 456 aaPredicted RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 SAP18O00422 153 aaKnown RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 RTCAO00442 366 aaKnown RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 MAN1A2O60476 641 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 PRMT3O60678 531 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 CLEC3AO75596 197 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 SIX3O95343 332 aaPredicted RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 WDPCPO95876 746 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 IL10P22301 178 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 JAK1P23458 1154 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 CERS1P27544 350 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 ACAP2Q15057 778 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 EIF2S3LQ2VIR3 472 aaKnown RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 PLAG1Q6DJT9 500 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 TMEM52Q8NDY8 209 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 TTLQ8NG68 377 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 FAR2Q96K12 515 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 LMF1Q96S06 567 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 EFCAB11Q9BUY7 163 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 REXO4Q9GZR2 422 aaKnown RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 TSPYL1Q9H0U9 437 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 KCNK13Q9HB14 408 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 COPG1Q9Y678 874 aaKnown RBP12.48□□□□□ -0.41
RNF4-215ENST00000511843 IKBKGQ9Y6K9 419 aa12.48□□□□□ -0.41
RNF4-215ENST00000511843 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 A0A087WUV0 522 aaPredicted RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 MYOCOSA0A1B0GUC4 107 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 DYTNA2CJ06 578 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 TGFBR3LH3BV60 316 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 CYC1P08574 325 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ICAM2P13598 275 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 EPB42P16452 691 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 GCAP28676 217 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 PPP2R1BP30154 601 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 MAGEA12P43365 314 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 SLC26A5P58743 744 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 DDX39BQ13838 428 aaKnown RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 UBAP2LQ14157 1087 aaKnown RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 TLR1Q15399 786 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ADPRMQ3LIE5 342 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 NIPAL1Q6NVV3 410 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 KLC3Q6P597 504 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ABHD17CQ6PCB6 329 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 UBE3DQ7Z6J8 389 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 CLNKQ7Z7G1 428 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 MYLK4Q86YV6 388 aaPredicted RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 CRLF3Q8IUI8 442 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 OR2L5Q8NG80 312 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 RHEBL1Q8TAI7 183 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 GRHL3Q8TE85 626 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ZNF473Q8WTR7 871 aaKnown RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 SCYL1Q96KG9 808 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 CSF3RQ99062 836 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 LPAR4Q99677 370 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 NPAS2Q99743 824 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 SORBS1Q9BX66 1292 aaKnown RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 MS4A8Q9BY19 250 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ANKRD10Q9NXR5 420 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 ANGPTL3Q9Y5C1 460 aa12.47□□□□□ -0.41
RNF4-215ENST00000511843 RP1L1Q8IWN7 2480 aaPredicted RBP12.47□□□□□ -0.41
RNF4-215ENST00000511843 HIVEP3Q5T1R4 2406 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 IGKV3D-11A0A0A0MRZ8 115 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 B3GALT2O43825 422 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 SEMA7AO75326 666 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 TGFB1P01137 390 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 GSTM2P28161 218 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 CASP2P42575 452 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
RNF4-215ENST00000511843 SERPINB9P50453 376 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 TNFSF10P50591 281 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 ALDH18A1P54886 795 aaKnown RBP12.46□□□□□ -0.41
RNF4-215ENST00000511843 LAPTM5Q13571 262 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 E2F2Q14209 437 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.41
RNF4-215ENST00000511843 TBCCQ15814 346 aa12.46□□□□□ -0.41
RNF4-215ENST00000511843 HIST2H2ACQ16777 129 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms