RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 AP3B1O00203 1094 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CXCL11O14625 94 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CHADO15335 359 aa2.54□□□□□ -2
SUB1-208ENST00000511175 TEX28O15482 410 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ARHGEF9O43307 516 aa2.54□□□□□ -2
SUB1-208ENST00000511175 LANCL1O43813 399 aa2.54□□□□□ -2
SUB1-208ENST00000511175 RNASEH1O60930 286 aaKnown RBP2.54□□□□□ -2
SUB1-208ENST00000511175 WDR1O75083 606 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SRSF10O75494 262 aaKnown RBP2.54□□□□□ -2
SUB1-208ENST00000511175 BMP10O95393 424 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PRAMEF12O95522 483 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SFTPCP11686 197 aa2.54□□□□□ -2
SUB1-208ENST00000511175 KRT3P12035 628 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PRG2P13727 222 aa2.54□□□□□ -2
SUB1-208ENST00000511175 IRF2P14316 349 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CYP3A5P20815 502 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PSMC4P43686 418 aa2.54□□□□□ -2
SUB1-208ENST00000511175 NKX2-1P43699 371 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 SLC6A12P48065 614 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CACNG1Q06432 222 aa2.54□□□□□ -2
SUB1-208ENST00000511175 IL10RBQ08334 325 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ZNF415Q09FC8 603 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PPP1R8Q12972 351 aaKnown RBP2.54□□□□□ -2
SUB1-208ENST00000511175 GPM6BQ13491 265 aa2.54□□□□□ -2
SUB1-208ENST00000511175 GTF2H2Q13888 395 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SHROOM1Q2M3G4 852 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 RABL6Q3YEC7 729 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 SPATA46Q5T0L3 261 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CYP4A22Q5TCH4 519 aa2.54□□□□□ -2
SUB1-208ENST00000511175 LYSMD4Q5XG99 296 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CENPPQ6IPU0 288 aa2.54□□□□□ -2
SUB1-208ENST00000511175 C11orf63Q6NUN7 778 aa2.54□□□□□ -2
SUB1-208ENST00000511175 GTF2H2CQ6P1K8 395 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ARSKQ6UWY0 536 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ZNF573Q86YE8 665 aa2.54□□□□□ -2
SUB1-208ENST00000511175 STHQ8IWL8 128 aa2.54□□□□□ -2
SUB1-208ENST00000511175 TDHQ8IZJ6 230 aa2.54□□□□□ -2
SUB1-208ENST00000511175 FAM71CQ8NEG0 241 aa2.54□□□□□ -2
SUB1-208ENST00000511175 OR52B4Q8NGK2 314 aa2.54□□□□□ -2
SUB1-208ENST00000511175 OR13J1Q8NGT2 312 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PPP4R1Q8TF05 950 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SLC38A5Q8WUX1 472 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CCDC107Q8WV48 283 aa2.54□□□□□ -2
SUB1-208ENST00000511175 GGHQ92820 318 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SEMA4DQ92854 862 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PIGTQ969N2 578 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PYCR2Q96C36 320 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CCDC51Q96ER9 411 aa2.54□□□□□ -2
SUB1-208ENST00000511175 LINGO1Q96FE5 620 aa2.54□□□□□ -2
SUB1-208ENST00000511175 FAM71F1Q96KD3 344 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 PKNOX2Q96KN3 472 aa2.54□□□□□ -2
SUB1-208ENST00000511175 FAM20AQ96MK3 541 aa2.54□□□□□ -2
SUB1-208ENST00000511175 TSSK2Q96PF2 358 aa2.54□□□□□ -2
SUB1-208ENST00000511175 TAAR6Q96RI8 345 aa2.54□□□□□ -2
SUB1-208ENST00000511175 PRMT1Q99873 361 aaKnown RBP2.54□□□□□ -2
SUB1-208ENST00000511175 PIGQQ9BRB3 760 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CABLES2Q9BTV7 478 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CARD6Q9BX69 1037 aa2.54□□□□□ -2
SUB1-208ENST00000511175 IDI2Q9BXS1 227 aa2.54□□□□□ -2
SUB1-208ENST00000511175 POLR1EQ9GZS1 481 aaKnown RBP2.54□□□□□ -2
SUB1-208ENST00000511175 CUEDC2Q9H467 287 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ACTL8Q9H568 366 aa2.54□□□□□ -2
SUB1-208ENST00000511175 FKRPQ9H9S5 495 aa2.54□□□□□ -2
SUB1-208ENST00000511175 GKN1Q9NS71 199 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CACNG5Q9UF02 275 aa2.54□□□□□ -2
SUB1-208ENST00000511175 CTNNA3Q9UI47 895 aa2.54□□□□□ -2
SUB1-208ENST00000511175 SH3GLB1Q9Y371 365 aa2.54□□□□□ -2
SUB1-208ENST00000511175 TMED3Q9Y3Q3 217 aa2.54□□□□□ -2
SUB1-208ENST00000511175 JRKLQ9Y4A0 524 aa2.54□□□□□ -2
SUB1-208ENST00000511175 ASB3Q9Y575 518 aa2.54□□□□□ -2
SUB1-208ENST00000511175 KLF2Q9Y5W3 355 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 SPIN1Q9Y657 262 aaPredicted RBP2.54□□□□□ -2
SUB1-208ENST00000511175 A0A0U1RRA0 63 aa2.53□□□□□ -2
SUB1-208ENST00000511175 ZCWPW2A0A1B0GU75 182 aa2.53□□□□□ -2
SUB1-208ENST00000511175 FAM230AA0A1W2PPH8 454 aa2.53□□□□□ -2
SUB1-208ENST00000511175 MED19A0JLT2 244 aaPredicted RBP2.53□□□□□ -2
SUB1-208ENST00000511175 CTAGE9A4FU28 777 aa2.53□□□□□ -2
SUB1-208ENST00000511175 C15orf62A8K5M9 175 aa2.53□□□□□ -2
SUB1-208ENST00000511175 NPIPA3F8WFD2 350 aa2.53□□□□□ -2
SUB1-208ENST00000511175 H7C423 109 aa2.53□□□□□ -2
SUB1-208ENST00000511175 BUD23O43709 281 aaKnown RBP2.53□□□□□ -2
SUB1-208ENST00000511175 SCO2O43819 266 aa2.53□□□□□ -2
SUB1-208ENST00000511175 GPRIN2O60269 458 aa2.53□□□□□ -2
SUB1-208ENST00000511175 ACSL4O60488 711 aa2.53□□□□□ -2
SUB1-208ENST00000511175 SNX3O60493 162 aa2.53□□□□□ -2
SUB1-208ENST00000511175 CIDEAO60543 219 aa2.53□□□□□ -2
SUB1-208ENST00000511175 LRP3O75074 770 aa2.53□□□□□ -2
SUB1-208ENST00000511175 SCGB2A1O75556 95 aa2.53□□□□□ -2
SUB1-208ENST00000511175 RPS6KA5O75582 802 aa2.53□□□□□ -2
SUB1-208ENST00000511175 STBD1O95210 358 aa2.53□□□□□ -2
SUB1-208ENST00000511175 SP9P0CG40 484 aa2.53□□□□□ -2
SUB1-208ENST00000511175 CTAGE8P0CG41 777 aa2.53□□□□□ -2
SUB1-208ENST00000511175 THRBP10828 461 aa2.53□□□□□ -2
SUB1-208ENST00000511175 ACP2P11117 423 aa2.53□□□□□ -2
SUB1-208ENST00000511175 HSPA8P11142 646 aaKnown RBP2.53□□□□□ -2
SUB1-208ENST00000511175 CD59P13987 128 aa2.53□□□□□ -2
SUB1-208ENST00000511175 CSF2RAP15509 400 aa2.53□□□□□ -2
SUB1-208ENST00000511175 GATA1P15976 413 aaPredicted RBP2.53□□□□□ -2
SUB1-208ENST00000511175 DPEP1P16444 411 aa2.53□□□□□ -2
SUB1-208ENST00000511175 ZNF18P17022 549 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms