RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ANKRD27Q96NW4 1050 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZSWIM1Q9BR11 485 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ACAT2Q9BWD1 397 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SFXN3Q9BWM7 321 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 BEX2Q9BXY8 128 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 GOLPH3LQ9H4A5 285 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 UGT1A10Q9HAW8 530 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ARNT2Q9HBZ2 717 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 NEK6Q9HC98 313 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 RPRD1BQ9NQG5 326 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 KLHL28Q9NXS3 571 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 NUDT4Q9NZJ9 180 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SEMA5BQ9P283 1151 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ATP6V1HQ9UI12 483 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZFP69BQ9UJL9 534 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 KCNS2Q9ULS6 477 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF232Q9UNY5 417 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 WASF3Q9UPY6 502 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SCN1AP35498 2009 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ARID2Q68CP9 1835 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 A0A087WZY1 265 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 A0A1W2PP18 115 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 MYO1GB0I1T2 1018 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 H0YGG7 62 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ACOX3O15254 700 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 HMGB3O15347 200 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 NDUFS4O43181 175 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 TLX2O43763 284 aaPredicted RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 STK16O75716 305 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 VAPBO95292 243 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 CD3EP07766 207 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SNRPB2P08579 225 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 PIRTP0C851 137 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 IMPDH2P12268 514 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 FOLR1P15328 257 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 GM2AP17900 193 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 CTSSP25774 331 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 PSMB4P28070 264 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 MPIP34949 423 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 RPL22P35268 128 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 MEOX1P50221 254 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ARSEP51690 589 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 PDX1P52945 283 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 PRKAA2P54646 552 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 UBE2NP61088 152 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 IFFO1Q0D2I5 559 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 GANABQ14697 944 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 FAM153CQ494X1 144 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 RFTN2Q52LD8 501 aaPredicted RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 XKR6Q5GH73 641 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 AGAP6Q5VW22 663 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 NCBP2-AS2Q69YL0 99 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ARL9Q6T311 187 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ARSKQ6UWY0 536 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 TMIGD1Q6UXZ0 262 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 TSPAN33Q86UF1 283 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZSWIM9Q86XI8 627 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 LIX1LQ8IVB5 337 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SLC43A2Q8N370 569 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 CDYL2Q8N8U2 506 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 MCUQ8NE86 351 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 OR1J4Q8NGS1 313 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 LILRB4Q8NHJ6 448 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 LMO3Q8TAP4 145 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 HMGCLL1Q8TB92 370 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 LZICQ8WZA0 190 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ERP27Q96DN0 273 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF845Q96IR2 970 aaPredicted RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 DACH2Q96NX9 599 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 SPATA9Q9BWV2 254 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 OR8D2Q9GZM6 311 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 TGIF2Q9GZN2 237 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 ZNF700Q9H0M5 742 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 EVA1AQ9H8M9 152 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 PDFQ9HBH1 243 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 POPDC3Q9HBV1 291 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 IL26Q9NPH9 171 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 CHCHD3Q9NX63 227 aaKnown RBP2.69□□□□□ -1.98
CLOCK-209ENST00000511124 UBP1Q9NZI7 540 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 CALML5Q9NZT1 146 aa2.69□□□□□ -1.98
CLOCK-209ENST00000511124 hCG_1818297A0A087WSY0 165 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 FAM95CA0A1B0GW59 222 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 SLC22A23A1A5C7 686 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 UBFD1O14562 309 aaKnown RBP2.68□□□□□ -1.98
CLOCK-209ENST00000511124 SPINT1O43278 529 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 GALR3O60755 368 aaPredicted RBP2.68□□□□□ -1.98
CLOCK-209ENST00000511124 CTNSO60931 367 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 MFAP3LO75121 409 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 CEACAM4O75871 244 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 BCL10O95999 233 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 TMIGD3P0DMS9 266 aaPredicted RBP2.68□□□□□ -1.98
CLOCK-209ENST00000511124 NR2F6P10588 404 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 POU3F2P20265 443 aaPredicted RBP2.68□□□□□ -1.98
CLOCK-209ENST00000511124 TBXA2RP21731 343 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 TNFSF4P23510 183 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 HPCAL1P37235 193 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 BCL6P41182 706 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 RANBP1P43487 201 aa2.68□□□□□ -1.98
CLOCK-209ENST00000511124 ASMTP46597 345 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms