RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 POLR2EP19388 210 aaKnown RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 CD82P27701 267 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 UGT1A3P35503 534 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 DDIT3P35638 169 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 SGSHP51688 502 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 MAP3K7CLP57077 242 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 YWHAZP63104 245 aaKnown RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 COG7P83436 770 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 ITGADQ13349 1161 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 C1orf61Q13536 156 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 CTF1Q16619 201 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 SGO1Q5FBB7 561 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 ZNF667Q5HYK9 610 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 ATP1A1-AS1Q5TC04 95 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 OR6B2Q6IFH4 312 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 KRBA2Q6ZNG9 492 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 GCNT7Q6ZNI0 430 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 ABI3BPQ7Z7G0 1075 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 KMT5CQ86Y97 462 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 MYLK4Q86YV6 388 aaPredicted RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 CCDC13Q8IYE1 715 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 MYCT1Q8N699 235 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 MAPK1IP1LQ8NDC0 245 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 VPS37AQ8NEZ2 397 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 LMX1AQ8TE12 382 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 POMGNT1Q8WZA1 660 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 NAT6Q93015 286 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 SH3KBP1Q96B97 665 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 SAAL1Q96ER3 474 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 TMA16Q96EY4 203 aaKnown RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 SLC45A3Q96JT2 553 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 PLIN2Q99541 437 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 MED10Q9BTT4 135 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 BARHL1Q9BZE3 327 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 TCEAL2Q9H3H9 227 aaPredicted RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 FBXO44Q9H4M3 255 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 CSNK1G1Q9HCP0 422 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 DMAP1Q9NPF5 467 aaPredicted RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 INTS6Q9UL03 887 aaKnown RBP5.95□□□□□ -1.46
USP53-206ENST00000510737 SARDHQ9UL12 918 aa5.95□□□□□ -1.46
USP53-206ENST00000510737 SPTY2D1-AS1A0A0U1RR47 76 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 GOLGA8IPA6NC78 632 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 GOLGA8JA6NMD2 632 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 HHLA1C9JL84 531 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 RPLP0P05388 317 aaKnown RBP5.94□□□□□ -1.46
USP53-206ENST00000510737 PLA2G4BP0C869 781 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 PATE4P0C8F1 98 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 ETFAP13804 333 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 MYOD1P15172 320 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 CSKP41240 450 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 ZNF131P52739 623 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 ST8SIA6P61647 398 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 PMP22Q01453 160 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 CDC20Q12834 499 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 CNTN1Q12860 1018 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 C16orf72Q14CZ0 275 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 NADK2Q4G0N4 442 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 PRR30Q53SZ7 412 aaPredicted RBP5.94□□□□□ -1.46
USP53-206ENST00000510737 TPRG1LQ5T0D9 272 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 KRT79Q5XKE5 535 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 LCTLQ6UWM7 567 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 RUFY3Q7L099 469 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 METTL27Q8N6F8 245 aaPredicted RBP5.94□□□□□ -1.46
USP53-206ENST00000510737 SCCPDHQ8NBX0 429 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 TMEM159Q96B96 161 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 LGALS12Q96DT0 336 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 SLC39A13Q96H72 371 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 IL12RB2Q99665 862 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 CMKLR1Q99788 373 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 REEP2Q9BRK0 252 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 LRRN3Q9H3W5 708 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 RBAKQ9NYW8 714 aaPredicted RBP5.94□□□□□ -1.46
USP53-206ENST00000510737 RASAL2Q9UJF2 1139 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 RCOR1Q9UKL0 485 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 ERVW-1Q9UQF0 538 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 KIF3AQ9Y496 699 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 MYH10P35580 1976 aa5.94□□□□□ -1.46
USP53-206ENST00000510737 PRRC2CQ9Y520 2896 aaKnown RBP5.93□□□□□ -1.46
USP53-206ENST00000510737 SVILO95425 2214 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 LOC101059948A0A1B0GTJ6 334 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 EDDM13A0A1B0GTR0 161 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 SLC7A4O43246 635 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 JAK2O60674 1132 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 MTA2O94776 668 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 SORBS2O94875 1100 aaKnown RBP5.93□□□□□ -1.46
USP53-206ENST00000510737 AGAP20933 346 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 HNRNPA2B1P22626 353 aaKnown RBP5.93□□□□□ -1.46
USP53-206ENST00000510737 HYIQ5T013 277 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 MMS22LQ6ZRQ5 1243 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 ANKRD9Q96BM1 317 aaPredicted RBP5.93□□□□□ -1.46
USP53-206ENST00000510737 SMARCD1Q96GM5 515 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 SNTG1Q9NSN8 517 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 KCND2Q9NZV8 630 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 RNF215Q9Y6U7 377 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 ZNF106Q9H2Y7 1883 aaKnown RBP5.93□□□□□ -1.46
USP53-206ENST00000510737 DOCK9Q9BZ29 2069 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 RP1P56715 2156 aa5.93□□□□□ -1.46
USP53-206ENST00000510737 ESPL1Q14674 2120 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 GOLGA6L7A0A1B0GV03 622 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms