RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 IMP4Q96G21 291 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 RNF170Q96K19 258 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 RBM14Q96PK6 669 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 OR4K3Q96R72 315 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 CCDC3Q9BQI4 270 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 LRRC3Q9BY71 257 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 TSPAN10Q9H1Z9 355 aaPredicted RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 SEMA4AQ9H3S1 761 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 MINDY3Q9H8M7 445 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 NTN4Q9HB63 628 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 TMEM27Q9HBJ8 222 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 MCCC2Q9HCC0 563 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 ACP6Q9NPH0 428 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 IL26Q9NPH9 171 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 MAN1C1Q9NR34 630 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 SPHK1Q9NYA1 384 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 DMGDHQ9UI17 866 aaKnown RBP3.47□□□□□ -1.85
USP53-205ENST00000509769 SARDHQ9UL12 918 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 PCDHB10Q9UN67 800 aa3.47□□□□□ -1.85
USP53-205ENST00000509769 A0A1W2PQ67 120 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 FAM234BA2RU67 622 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 RFXAPO00287 272 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 FLRT2O43155 660 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SIGLEC6O43699 453 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SDC3O75056 442 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ABLIM3O94929 683 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 RASAL1O95294 804 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 CRYABP02511 175 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 C1QBP02746 253 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 CYP21A2P08686 494 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 OR10J4P0C629 311 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SULT1A3P0DMM9 295 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SULT1A4P0DMN0 295 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 JUNDP17535 347 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 BDNFP23560 247 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ADRA1DP25100 572 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 DSG3P32926 999 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 BSGP35613 385 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 GGT5P36269 586 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 HSD17B2P37059 387 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ASPAP45381 313 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 OR1G1P47890 313 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 KIAA1024LP59773 190 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 PKIAP61925 76 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 MRPS5P82675 430 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 CDK5Q00535 292 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 DMWDQ09019 674 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 GTF2H2Q13888 395 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 EIF2B1Q14232 305 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 ATP6AP1Q15904 470 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 NTRK2Q16620 822 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 PFKFB4Q16877 469 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ARHGAP11BQ3KRB8 267 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 CRY2Q49AN0 593 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 VARS2Q5ST30 1063 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 CD276Q5ZPR3 534 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 STEAP3Q658P3 488 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 GTF2H2CQ6P1K8 395 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SEZ6L2Q6UXD5 910 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ISLR2Q6UXK2 745 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 NSMFQ6X4W1 530 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 DBX2Q6ZNG2 339 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ABHD13Q7L211 337 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 PRSS48Q7RTY5 328 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 KCTD20Q7Z5Y7 419 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 SLC9B2Q86UD5 537 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 RANBP3LQ86VV4 465 aaPredicted RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 ECHDC2Q86YB7 292 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 VRK3Q8IV63 474 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 FUNDC1Q8IVP5 155 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 UEVLDQ8IX04 471 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 KLHDC8BQ8IXV7 354 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 RDH10Q8IZV5 341 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ANKLE1Q8NAG6 615 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 GSTCDQ8NEC7 633 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 ZSWIM2Q8NEG5 633 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 TMEM185AQ8NFB2 350 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 PXT1Q8NFP0 134 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 LPGAT1Q92604 370 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 CELF1Q92879 486 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 FBXO32Q969P5 355 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 L3HYPDHQ96EM0 354 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 CDKN2AIPNLQ96HQ2 116 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 TMEM121BQ9BXQ6 578 aaPredicted RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 NIF3L1Q9GZT8 377 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 OR2AG1Q9H205 316 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 GSKIPQ9P0R6 139 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 KLHL9Q9P2J3 617 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 MYEF2Q9P2K5 600 aaKnown RBP3.46□□□□□ -1.85
USP53-205ENST00000509769 SLC17A6Q9P2U8 582 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 PLLPQ9Y342 182 aa3.46□□□□□ -1.85
USP53-205ENST00000509769 A0A1W2PPQ1 181 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 RPS10-NUDT3A0A1W2PQS6 291 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 CLDN24A6NM45 220 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 ERVV-2B6SEH9 535 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 PPP5D1E7EU14 171 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 IRS4O14654 1257 aaPredicted RBP3.46□□□□□ -1.86
USP53-205ENST00000509769 FFAR3O14843 346 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 AP1G1O43747 822 aa3.46□□□□□ -1.86
USP53-205ENST00000509769 SLC25A12O75746 678 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms