RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 SLC38A9Q8NBW4 561 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SCCPDHQ8NBX0 429 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 OR6C4Q8NGE1 309 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 OR52B4Q8NGK2 314 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 OR2T3Q8NH03 318 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 VANGL1Q8TAA9 524 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 DQX1Q8TE96 717 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SAP25Q8TEE9 199 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 UBLCP1Q8WVY7 318 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 ABHD8Q96I13 439 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 METTL2AQ96IZ6 378 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SFXN2Q96NB2 322 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 QRFPRQ96P65 431 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 RASL10BQ96S79 203 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SECISBP2Q96T21 854 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 RAD9AQ99638 391 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 HAUS8Q9BT25 410 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 FNDC11Q9BVV2 318 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 ZNF416Q9BWM5 594 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 TMEM39BQ9GZU3 492 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SIRPDQ9H106 197 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 NAPBQ9H115 298 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 TMEM245Q9H330 911 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 UPF2Q9HAU5 1272 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 CDH20Q9HBT6 801 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 CRLF2Q9HC73 371 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 MRPL17Q9NRX2 175 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 GLRX2Q9NS18 164 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 ZCCHC3Q9NUD5 404 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 PANK4Q9NVE7 773 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 CNOT2Q9NZN8 540 aaKnown RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 PADI3Q9ULW8 664 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 SNX6Q9UNH7 406 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 ENTPD4Q9Y227 616 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 CAB39Q9Y376 341 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-204ENST00000509268 JRKLQ9Y4A0 524 aa1.85□□□□□ -2.11
XRCC4-204ENST00000509268 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 A0A087X0K7 114 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PRSS51A0A1B0GVH4 220 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 ILVBLA1L0T0 632 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 NEMP2A6NFY4 417 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 H0YC42 278 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PES1O00541 588 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 HS3ST1O14792 307 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 XPO1O14980 1071 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 TEX28O15482 410 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 TLX2O43763 284 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 NUDT21O43809 227 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 TSPAN1O60635 241 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 WDR1O75083 606 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 ERLIN1O75477 346 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 NDUFB4O95168 129 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 GSRP00390 522 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 IGKV3-15P01624 115 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 IGHV4-39P01824 125 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 ASGR1P07306 291 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 CLUP10909 449 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 EPB41P11171 864 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 EPCAMP16422 314 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PAX7P23759 505 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PIK3R1P27986 724 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PTPN6P29350 595 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PKLRP30613 574 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 CCR1P32246 355 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PTGER4P35408 488 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 CDX1P47902 265 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SLC6A12P48065 614 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 MTTPP55157 894 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SH3BGRP55822 239 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 CLDN15P56746 228 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SPIBQ01892 262 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PNRC1Q12796 327 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PPP1R8Q12972 351 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 DDX39BQ13838 428 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 GK2Q14410 553 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 USH1GQ495M9 461 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 CCDC152Q4G0S7 254 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 KCTD21Q4G0X4 260 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SIRPB2Q5JXA9 342 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SLC25A30Q5SVS4 291 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SPOUT1Q5T280 376 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 FAM46CQ5VWP2 391 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 B3GLCTQ6Y288 498 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SIGLEC15Q6ZMC9 328 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 RUFY3Q7L099 469 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 ADGRD2Q7Z7M1 963 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 RTN4RL2Q86UN3 420 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 MEX3DQ86XN8 651 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 C1orf87Q8N0U7 546 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 FGFRL1Q8N441 504 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 RNF148Q8N7C7 305 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 EIF1ADQ8N9N8 165 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 PAPD5Q8NDF8 572 aaKnown RBP1.84□□□□□ -2.12
XRCC4-204ENST00000509268 STEAP2Q8NFT2 490 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 OR2AK2Q8NG84 335 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 OR13C2Q8NGS9 318 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 HMGCLL1Q8TB92 370 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 AGR3Q8TD06 166 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 ANKRD49Q8WVL7 239 aa1.84□□□□□ -2.12
XRCC4-204ENST00000509268 SYN2Q92777 582 aaPredicted RBP1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms