RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 IQCHQ86VS3 1027 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 FAM71AQ8IYT1 594 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SPARTQ8N0X7 666 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TTLQ8NG68 377 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OR6N1Q8NGY5 312 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CLHC1Q8NHS4 586 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CENPIQ92674 756 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 BORCS8Q96FH0 119 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TCTN2Q96GX1 697 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZC3HAV1LQ96H79 300 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MS4A3Q96HJ5 214 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SARGQ9BW04 601 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HDHD2Q9H0R4 259 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CLMPQ9H6B4 373 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HHATLQ9HCP6 504 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TIMMDC1Q9NPL8 285 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC35C2Q9NQQ7 365 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MRPL39Q9NYK5 338 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM216Q9P0N5 145 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SIX4Q9UIU6 781 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CROTQ9UKG9 612 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 A6NLC8 198 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF11O60813 436 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MFN2O95140 757 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZIC2O95409 532 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MT-CO1P00395 513 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GOT2P00505 430 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC6A9P48067 706 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TSPAN5P62079 268 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CFHR1Q03591 330 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KLRB1Q12918 225 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LY6DQ14210 128 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KCNAB1Q14722 419 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CHI3L2Q15782 390 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM35AQ53FP2 167 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL12Q53G59 568 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GRTP1Q5TC63 336 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ARHGAP36Q6ZRI8 547 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 VSTM4Q8IW00 320 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TCAIMQ8N3R3 496 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 JOSD2Q8TAC2 188 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HM13Q8TCT9 377 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TFAP2BQ92481 460 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ISG20Q96AZ6 181 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PPCDCQ96CD2 204 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ERP44Q9BS26 406 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 UNKQ9C0B0 810 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GRIP2Q9C0E4 1043 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LUZP4Q9P127 313 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PADI1Q9ULC6 663 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 C17orf113A0A1B0GUU1 675 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CCDC154A6NI56 674 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC9B1P1A6NJY1 282 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OR6C65A6NJZ3 312 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 H0YJX3 145 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 J3QKU1 62 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CAPN5O15484 640 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HSPA12AO43301 675 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM3O75382 744 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SERPINA1P01009 418 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CYP1A2P05177 515 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 C8GP07360 202 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GSTT2P0CG29 244 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GSTT2BP0CG30 244 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CPN2P22792 545 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC6A2P23975 617 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 GDF1P27539 372 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OMPP47874 163 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KCNJ1P48048 391 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HK3P52790 923 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PLK1P53350 603 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PNLIPRP1P54315 467 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 RPS15AP62244 130 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 AIMP2Q13155 320 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PFKFB4Q16877 469 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 DNAL1Q4LDG9 190 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 FAM98BQ52LJ0 330 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 KHDC1LQ5JSQ8 128 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ARMC3Q5W041 872 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM198Q66K66 360 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LIN54Q6MZP7 749 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 WDR59Q6PJI9 974 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CLEC17AQ6ZS10 378 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OR8K5Q8NH50 307 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SETD6Q8TBK2 473 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 XAGE5Q8WWM1 108 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PDLIM2Q96JY6 352 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 COG8Q96MW5 612 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SIKE1Q9BRV8 207 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF395Q9H8N7 513 aaPredicted RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 VIPAS39Q9H9C1 493 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 UBTD1Q9HAC8 227 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ACP6Q9NPH0 428 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ETNK2Q9NVF9 386 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ING3Q9NXR8 418 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MGAT4AQ9UM21 535 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 AP3M1Q9Y2T2 418 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ANKRD36A6QL64 1941 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SSU72P8A0A1W2PR75 194 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 hCG_1807616A0A1W2PRN6 198 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms