RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 SPAG5Q96R06 1193 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 LPAR4Q99677 370 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 MGME1Q9BQP7 344 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 CLEC7AQ9BXN2 247 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 NYXQ9GZU5 481 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 ERAP1Q9NZ08 941 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 NARFQ9UHQ1 456 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 SNX7Q9UNH6 387 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 EXOGQ9Y2C4 368 aaKnown RBP5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 KIF3AQ9Y496 699 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 RGPD3A6NKT7 1758 aaPredicted RBP5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 RGPD4Q7Z3J3 1758 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 LRRC37AA6NMS7 1700 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 COL4A1P02462 1669 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 DUOX1Q9NRD9 1551 aa5.08□□□□□ -1.6
UBE2D3-217ENST00000504211 SNED1Q8TER0 1413 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NAV1Q8NEY1 1877 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 QSER1Q2KHR3 1735 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NRXN2Q9P2S2 1712 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF195O14628 629 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 TEX28O15482 410 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 GPAA1O43292 621 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF883P0CG24 379 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 DNA2P51530 1060 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 LUMP51884 338 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NAGLUP54802 743 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 MTCP1P56278 107 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 IRX1P78414 480 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 HMGN5P82970 282 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 MYL7Q01449 175 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NONOQ15233 471 aaKnown RBP eCLIP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ATL3Q6DD88 541 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 CAVIN1Q6NZI2 390 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 PTAR1Q7Z6K3 402 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF614Q8N883 585 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NECAB1Q8N987 351 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 NCOA7Q8NI08 942 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 PIK3R3Q92569 461 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 SIPA1Q96FS4 1042 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ZSCAN16Q9H4T2 348 aaPredicted RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 CHCHD3Q9NX63 227 aaKnown RBP5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 MYH1P12882 1939 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 ANKRD31Q8N7Z5 1873 aa5.07□□□□□ -1.6
UBE2D3-217ENST00000504211 LTBP1Q14766 1721 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF532Q9HCE3 1301 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 SALL1Q9NSC2 1324 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 A0A087WUV0 522 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 TSPY2A6NKD2 308 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF500O60304 480 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 SIX3O95343 332 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ATP1B1P05026 303 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ADRA2CP18825 462 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CYP2A7P20853 494 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CLK1P49759 484 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 RGS7P49802 495 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 PAX9P55771 341 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CSNK2BP67870 215 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CCDC173Q0VFZ6 552 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 PSMD6Q15008 389 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CCDC183Q5T5S1 534 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 TRAT1Q6PIZ9 186 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 IL27RAQ6UWB1 636 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ZNF497Q6ZNH5 498 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ANKRD33Q7Z3H0 272 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 DNAJB7Q7Z6W7 309 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 FAM219AQ8IW50 185 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 THNSL1Q8IYQ7 743 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 OR7A2PQ8NGA2 310 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 OCC1Q8TAD7 63 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 P2RX5Q93086 422 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 TSACCQ96A04 125 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 TCEANC2Q96MN5 208 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 NKX3-1Q99801 234 aaPredicted RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 SYT15Q9BQS2 421 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 GTPBP2Q9BX10 602 aaKnown RBP5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 SDCBP2Q9H190 292 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 CFAP45Q9UL16 551 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 ANGPTL3Q9Y5C1 460 aa5.06□□□□□ -1.6
UBE2D3-217ENST00000504211 NID2Q14112 1375 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 VPS37CA5D8V6 355 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 CCL24O00175 119 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 IDH1O75874 414 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 LUC7L3O95232 432 aaKnown RBP5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 CLDN1O95832 211 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 EPORP19235 508 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 GMPSP49915 693 aaPredicted RBP5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 MFAP3P55082 362 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 CACNG1Q06432 222 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 TRDNQ13061 729 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 TRIM29Q14134 588 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 OPCMLQ14982 345 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 EFTUD2Q15029 972 aaKnown RBP eCLIP5.05□□□□□ -1.66e-8■■■■■ 34.9
UBE2D3-217ENST00000504211 HLA-BQ31612 363 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 SPECC1Q5M775 1068 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 Q6ZRP5 223 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 TIGD4Q8IY51 512 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 RCOR2Q8IZ40 523 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 FAM89BQ8N5H3 189 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 FAM184AQ8NB25 1140 aa5.05□□□□□ -1.6
UBE2D3-217ENST00000504211 NSMAFQ92636 917 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms