RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MYBL2P10244 700 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ENDOUP21128 410 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 MAOAP21397 527 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 RPA3P35244 121 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 CDKN2BP42772 138 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 SERPINB4P48594 390 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 TRPC1P48995 793 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 DNASE1L1P49184 302 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 CYB561P49447 251 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ASCL1P50553 236 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 EIF3BP55884 814 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 PPIAP62937 165 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 MEF2AQ02078 507 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 RHAGQ02094 409 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 CUL1Q13616 776 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 TMED2Q15363 201 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 NSDHLQ15738 373 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 EXT1Q16394 746 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 STX1AQ16623 288 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 GXYLT1Q4G148 440 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 DNAJC21Q5F1R6 531 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 CCDC181Q5TID7 509 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 DENND5AQ6IQ26 1287 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 HMBOX1Q6NT76 420 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 AADACL2Q6P093 401 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ARHGAP11AQ6P4F7 1023 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ALKBH5Q6P6C2 394 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 KIAA0408Q6ZU52 694 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 SEM1Q6ZVN7 128 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 VN1R4Q7Z5H5 301 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 CAMKMTQ7Z624 323 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 UBE3DQ7Z6J8 389 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 PAQR7Q86WK9 346 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 RPS19BP1Q86WX3 136 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 LILRA2Q8N149 483 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ARHGEF39Q8N4T4 335 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 HORMAD2Q8N7B1 307 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 OR2A1Q8NGT9 310 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 OR6P1Q8NGX9 317 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 OR51Q1Q8NH59 317 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 DTX3LQ8TDB6 740 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 STK35Q8TDR2 534 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 CTNNBL1Q8WYA6 563 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 RERGQ96A58 199 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 SLC22A18Q96BI1 424 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ALKBH8Q96BT7 664 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 MBD6Q96DN6 1003 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ZNF778Q96MU6 729 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 NAP1L5Q96NT1 182 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 CYTH2Q99418 400 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 LPAR4Q99677 370 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 OLFM1Q99784 485 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 SH3GL2Q99962 352 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 TTTY12Q9BZ98 90 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 XPO4Q9C0E2 1151 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 PLEKHF2Q9H8W4 249 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 MMP25Q9NPA2 562 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 LUC7LQ9NQ29 371 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 SPTLC3Q9NUV7 552 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 NLE1Q9NVX2 485 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 C6orf203Q9P0P8 240 aaPredicted RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 CDC14AQ9UNH5 594 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 TFR2Q9UP52 801 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 ERVK-11Q9UQG0 969 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 WIF1Q9Y5W5 379 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 DUSP10Q9Y6W6 482 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 PHF3Q92576 2039 aaKnown RBP3.37□□□□□ -1.87
USP46-205ENST00000504078 CNTRLQ7Z7A1 2325 aa3.37□□□□□ -1.87
USP46-205ENST00000504078 NCKAP5O14513 1909 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ABCA4P78363 2273 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SCN3AQ9NY46 2000 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 NSD1Q96L73 2696 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 A0A0G2JN53 185 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PRAMEF27A3QJZ7 478 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TUBAL3A6NHL2 446 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SAGE2PA6NJ88 616 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 C4orf51C9J302 202 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GOLGA8KD6RF30 607 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GOLGA8TH3BQL2 631 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ACOT7O00154 380 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 WWP2O00308 870 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CLDN4O14493 209 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 FCHO1O14526 889 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PHF1O43189 567 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 SRPX2O60687 465 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 ITGA10O75578 1167 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ANXA9O76027 345 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MYO1DO94832 1006 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 AP2A2O94973 939 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 OR6B1O95007 311 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 EPOP01588 193 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 HRGP04196 525 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 RPN2P04844 631 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 APOA4P06727 396 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ICAM2P13598 275 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ZFXP17010 805 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 COMTP21964 271 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CPOXP36551 454 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 BCL6P41182 706 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms