RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GDPD4Q6W3E5 623 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 ZNF771Q7L3S4 317 aaPredicted RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 SLC26A9Q7LBE3 791 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 BNIPLQ7Z465 357 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 TRPT1Q86TN4 253 aaKnown RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 RNF149Q8NC42 400 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 OR13C5Q8NGS8 318 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 GPR148Q8TDV2 347 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 SLCO4A1Q96BD0 722 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 MRPL38Q96DV4 380 aaKnown RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 KCNK16Q96T55 309 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 NYXQ9GZU5 481 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 CD93Q9NPY3 652 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 EXOC1Q9NV70 894 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 FLRT3Q9NZU0 649 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 CGNQ9P2M7 1197 aaKnown RBP3.27□□□□□ -1.89
CALD1-224ENST00000498254 EPHA6Q9UF33 1036 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 NARFQ9UHQ1 456 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 PILRAQ9UKJ1 303 aa3.27□□□□□ -1.89
CALD1-224ENST00000498254 STK36Q9NRP7 1315 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 A0A087WUV0 522 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 DENND3A2RUS2 1198 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 GLTPD2A6NH11 291 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ZNF195O14628 629 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 CPLX1O14810 134 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ECE2O60344 883 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 CYTIPO60759 359 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SAP30O75446 220 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 CLN5O75503 358 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 CDK2AP2O75956 126 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 DIRAS3O95661 229 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 MMP10P09238 476 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SNHG28P0DPA3 235 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 PRKAR1AP10644 381 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 NCF1P14598 390 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 CTNNA2P26232 953 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 STIP1P31948 543 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 OR1D2P34982 312 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 TNNT2P45379 298 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 SLC6A12P48065 614 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 TKTL1P51854 596 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 NLRP11P59045 1033 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 DCDC1P59894 354 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 SPHARQ15513 63 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ZKSCAN8Q15776 578 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 ZNF74Q16587 644 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 STX1AQ16623 288 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 DUSP5Q16690 384 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 FASTKD1Q53R41 847 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 XKR6Q5GH73 641 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 FGD3Q5JSP0 725 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 CD164L2Q6UWJ8 174 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 TMEM26Q6ZUK4 368 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 C15orf52Q6ZUT6 534 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 Q71RC1 249 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 FCRLAQ7L513 359 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ADGRD2Q7Z7M1 963 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 LMNTD2Q8IXW0 634 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ZNF444Q8N0Y2 327 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 GPC2Q8N158 579 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SIDT2Q8NBJ9 832 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 CCDC197Q8NCU1 140 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 OR2T11Q8NH01 316 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 OR1L3Q8NH93 324 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SCARB1Q8WTV0 552 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 APOBEC4Q8WW27 367 aaKnown RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 HPSE2Q8WWQ2 592 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SELENOMQ8WWX9 145 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SMPDL3AQ92484 453 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SUSD6Q92537 303 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SLC35C1Q96A29 364 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 GUCD1Q96NT3 240 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 TAAR6Q96RI8 345 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 LPAR4Q99677 370 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 COQ7Q99807 217 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 FUNDC2Q9BWH2 189 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.26□□□□□ -1.89
CALD1-224ENST00000498254 PLEK2Q9NYT0 353 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 RAI14Q9P0K7 980 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 DBF4Q9UBU7 674 aaPredicted RBP3.26□□□□□ -1.89
CALD1-224ENST00000498254 MAN1B1Q9UKM7 699 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 SMC3Q9UQE7 1217 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 OR1A2Q9Y585 309 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 WDR81Q562E7 1941 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 ARID2Q68CP9 1835 aa3.26□□□□□ -1.89
CALD1-224ENST00000498254 FAM205AQ6ZU69 1335 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 KIAA1210Q9ULL0 1709 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 A0A087WZ39 114 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 TMEM89A2RUT3 159 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 KPNA7A9QM74 516 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 EEF2KO00418 725 aaKnown RBP3.25□□□□□ -1.89
CALD1-224ENST00000498254 ADAM12O43184 909 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 SSX5O60225 188 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 FGF17O60258 216 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 LRP3O75074 770 aa3.25□□□□□ -1.89
CALD1-224ENST00000498254 LRCH4O75427 683 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms