RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TTC19Q6DKK2 380 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 ABHD17CQ6PCB6 329 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 MILR1Q7Z6M3 343 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 CROCCP2Q86T23 111 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 LAPTM4BQ86VI4 370 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 GALNT16Q8N428 558 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 CCDC63Q8NA47 563 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 OR5T3Q8NGG3 340 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 HUS1BQ8NHY5 278 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 SEMA4BQ9NPR2 832 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 MKS1Q9NXB0 559 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 MRPS33Q9Y291 106 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-213ENST00000496785 LOC102723996A0A087X1L8 192 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 OR7A17O14581 309 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 DLX3O60479 287 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 MLYCDO95822 493 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 IMPDH1P20839 514 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 PTX3P26022 381 aaPredicted RBP18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 RAP1GDS1P52306 607 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 PRKAA2P54646 552 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 SLC18A2Q05940 514 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 IFT88Q13099 833 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 ZRSR2Q15696 482 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 ZNF678Q5SXM1 525 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 DEPDC1Q5TB30 811 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 KHDRBS2Q5VWX1 349 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 TMEM205Q6UW68 189 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 SH2D5Q6ZV89 423 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 NDUFAF7Q7L592 441 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 NSUN5Q96P11 429 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 F2RL3Q96RI0 385 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 SEMA4CQ9C0C4 833 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 ZBTB26Q9HCK0 441 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 DMRT3Q9NQL9 472 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 SENP1Q9P0U3 644 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 PPT2Q9UMR5 302 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 RNF11Q9Y3C5 154 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 ZNF451Q9Y4E5 1061 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 HEMK1Q9Y5R4 338 aaPredicted RBP18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 SPACA6W5XKT8 324 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 CCDC88CQ9P219 2028 aa18.16■□□□□ 0.5
CTDSP1-213ENST00000496785 MAGEB17A8MXT2 336 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 FOXE1O00358 373 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 PLIN3O60664 434 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 JRKO75564 520 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TGFB1P01137 390 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 PROCP04070 461 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 ICAM2P13598 275 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 ITGA3P26006 1051 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 RAB38P57729 211 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 OLR1P78380 273 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 CLCQ05315 142 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 NFATC3Q12968 1075 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TRAF3Q13114 568 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 MYBPC3Q14896 1274 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 AP5B1Q2VPB7 878 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 VWA5B1Q5TIE3 1220 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 FAAH2Q6GMR7 532 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 ADNP2Q6IQ32 1131 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 ZYG11AQ6WRX3 759 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TRABD2AQ86V40 505 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 C4orf33Q8N1A6 199 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 CA13Q8N1Q1 262 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 PLPP5Q8NEB5 264 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 ARMC2Q8NEN0 867 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 OR52B6Q8NGF0 335 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TM9SF4Q92544 642 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 RGMAQ96B86 450 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 L3HYPDHQ96EM0 354 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 APOPT1Q96IL0 206 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 QRFPRQ96P65 431 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TMEM237Q96Q45 408 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 MTERF1Q99551 399 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TUBB6Q9BUF5 446 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 AICDAQ9GZX7 198 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 MLXIPLQ9NP71 852 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 C5AR2Q9P296 337 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TRPS1Q9UHF7 1281 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 SNX6Q9UNH7 406 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 TP53TG5Q9Y2B4 290 aa18.15■□□□□ 0.5
CTDSP1-213ENST00000496785 NUP210LQ5VU65 1888 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 IGHV1-45A0A0A0MS14 117 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 CCDC151A5D8V7 595 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 C4orf51C9J302 202 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 H3BQF6 201 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 CLDN4O14493 209 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 TBX6O95947 436 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 B3GALT4O96024 378 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 COX6A1P12074 109 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 SSR2P43308 183 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 ASPHQ12797 758 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 CUL3Q13618 768 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 NSDHLQ15738 373 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 KRT71Q3SY84 523 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 FRG2Q64ET8 278 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 QSOX2Q6ZRP7 698 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 ASB18Q6ZVZ8 466 aa18.14■□□□□ 0.49
CTDSP1-213ENST00000496785 CPEB2Q7Z5Q1 589 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms