RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 EDARADDQ8WWZ3 215 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 ZBED6CLQ96FA7 236 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 DPH7Q9BTV6 452 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 DEFB126Q9BYW3 111 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 REG4Q9BYZ8 158 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 DEPPQ9NTK1 212 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 KCMF1Q9P0J7 381 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 HCN3Q9P1Z3 774 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 NDRG3Q9UGV2 375 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 ZDHHC9Q9Y397 364 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 MRFAP1Q9Y605 127 aa8.9□□□□□ -0.98
SMARCAL1-213ENST00000496037 TRGV5A0A0B4J1U4 118 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 ATP6AP2A0A1C7CYW4 349 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SLC5A10A0PJK1 596 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 C5orf60A6NFR6 353 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 ATP6AP2O75787 350 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CDC123O75794 336 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SOX30O94993 753 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CRTAMO95727 393 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 RHCEP18577 417 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 NFKB1P19838 968 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 EEF1GP26641 437 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CEACAM8P31997 349 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 MC4RP32245 332 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 MPP1Q00013 466 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CAPRIN1Q14444 709 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CLEC12BQ2HXU8 276 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 FBXO42Q6P3S6 717 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SLCO4C1Q6ZQN7 724 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SEM1Q6ZVN7 128 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 TMEM251Q8N6I4 163 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 MLKLQ8NB16 471 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 OR13C4Q8NGS5 318 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 OR9A4Q8NGU2 314 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 TSLPQ969D9 159 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 PDLIM2Q96JY6 352 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 CAPZA3Q96KX2 299 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 TEKT5Q96M29 485 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 UTP6Q9NYH9 597 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SMARCAL1Q9NZC9 954 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 LPAR3Q9UBY5 353 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZKSCAN5Q9Y2L8 839 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 POLR3KQ9Y2Y1 108 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 PCDHGB3Q9Y5G1 929 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 NFS1Q9Y697 457 aa8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-213ENST00000496037 A0A0U1RQJ8 604 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 A8MVJ9 347 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 MAGEB17A8MXT2 336 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 HCN1O60741 890 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ERN1O75460 977 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ITGA10O75578 1167 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 GLSO94925 669 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 NSA2O95478 260 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 PKMP14618 531 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 PAX1P15863 534 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 CFPP27918 469 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ADH6P28332 368 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 OPRM1P35372 400 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 TIMP3P35625 211 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 SOX18P35713 384 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 SSR4P51571 173 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZNF136P52737 540 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 KLF1Q13351 362 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 MPP3Q13368 585 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 GRB7Q14451 532 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZNF460Q14592 562 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 SLC10A1Q14973 349 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 TCP11X2Q5H9J9 407 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 LIPNQ5VXI9 398 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 KCTD11Q693B1 232 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 PLEKHM3Q6ZWE6 761 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ABHD13Q7L211 337 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 LACC1Q8IV20 430 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 OR8H2Q8N162 312 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ZMYND19Q96E35 227 aaPredicted RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 PIK3IP1Q96FE7 263 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 BTBD6Q96KE9 485 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 RBM24Q9BX46 236 aaKnown RBP8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ADAM19Q9H013 955 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 IL1RL2Q9HB29 575 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 HPF1Q9NWY4 346 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 IMPACTQ9P2X3 320 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 ANAPC7Q9UJX3 599 aa8.88□□□□□ -0.99
SMARCAL1-213ENST00000496037 A0A0G2JMM0 328 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 TRBV11-1A0A0K0K1C0 115 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 A0A1W2PPB8 328 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 A0A1W2PRS3 328 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 KIR3DP1A8MWS1 328 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 F8W8V4 182 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 G3V3Y1 287 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 CCL22O00626 93 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 IL33O95760 270 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 OR56A5P0C7T3 313 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 GZMAP12544 262 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 CD68P34810 354 aaPredicted RBP8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 ARHGAP25P42331 645 aa8.87□□□□□ -0.99
SMARCAL1-213ENST00000496037 AGFG1P52594 562 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms