RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 OR51B5Q9H339 312 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 CLK4Q9HAZ1 481 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 MID1IP1Q9NPA3 183 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 SEMA3GQ9NS98 782 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 C3orf18Q9UK00 162 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 MAN2B2Q9Y2E5 1009 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 IGLV3-12A0A075B6K2 115 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 MAGEB17A8MXT2 336 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 PPP6CO00743 305 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 CHST10O43529 356 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 CNOT3O75175 753 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 BMP10O95393 424 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 B3GALT4O96024 378 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 ENO1P06733 434 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NEFHP12036 1026 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 H2AFXP16104 143 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 JAK1P23458 1154 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 ALDH3A1P30838 453 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NEK2P51955 445 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 EMP2P54851 167 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 MTTPP55157 894 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 RPS13P62277 151 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 OLR1P78380 273 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 RCN2Q14257 317 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 ADPRMQ3LIE5 342 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SGO1Q5FBB7 561 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 TNFAIP8L3Q5GJ75 292 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 DEPDC1Q5TB30 811 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 ABHD17CQ6PCB6 329 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 FRMD7Q6ZUT3 714 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NUDCD3Q8IVD9 361 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 OR5T3Q8NGG3 340 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 PPP1R14CQ8TAE6 165 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 WDR20Q8TBZ3 569 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SELENOMQ8WWX9 145 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 METTL21AQ8WXB1 218 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NACC2Q96BF6 587 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 CNDP1Q96KN2 507 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 OR1F2PQ96R84 312 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SERPINI1Q99574 410 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SPSB2Q99619 263 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 TBCDQ9BTW9 1192 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 TRMOQ9BU70 441 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NPLQ9BXD5 320 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SLC29A3Q9BZD2 475 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 GSTO2Q9H4Y5 243 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 TMBIM4Q9HC24 238 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 NMRK1Q9NWW6 199 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 PSD3Q9NYI0 1048 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 AHSPQ9NZD4 102 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 MKL2Q9ULH7 1088 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 SPACA6W5XKT8 324 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 MGAQ8IWI9 3026 aa11.43□□□□□ -0.58
CSNK1E-213ENST00000495232 PTPRQQ9UMZ3 2332 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 IDSB3KWA1 339 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 SAP18O00422 153 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 PCDH17O14917 1159 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 ULK1O75385 1050 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 ESRRBO95718 433 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 TBX6O95947 436 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 BPGMP07738 259 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 UMODP07911 640 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 FURINP09958 794 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 RNH1P13489 461 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 MMP11P24347 488 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 SSR2P43308 183 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 TSFMP43897 325 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 CCR10P46092 362 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 RRADP55042 308 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 FOXL2P58012 376 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 MAGOHP61326 146 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 SNRPNP63162 240 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 CUL3Q13618 768 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 OR4C11Q6IEV9 310 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 ZC3H7AQ8IWR0 971 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 RNF175Q8N4F7 328 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 ADAMTS18Q8TE60 1221 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 AGAP11Q8TF27 550 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 APOBEC4Q8WW27 367 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 EXTL1Q92935 676 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 TBC1D20Q96BZ9 403 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 FER1L6-AS2Q96M78 137 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 MECRQ9BV79 373 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 AICDAQ9GZX7 198 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 EML4Q9HC35 981 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 PPT2Q9UMR5 302 aa11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 MRPS33Q9Y291 106 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-213ENST00000495232 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 A0A1B0GTL3 188 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ARHGAP10A1A4S6 786 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 ARGFXA6NJG6 315 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 C4orf51C9J302 202 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 NPHS1O60500 1241 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 CDC123O75794 336 aaPredicted RBP11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 PDYNP01213 254 aa11.41□□□□□ -0.58
CSNK1E-213ENST00000495232 FHP07954 510 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms