RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 GP5P40197 560 aa9□□□□□ -0.97
MSH5-218ENST00000494646 TDGF1P3P51864 188 aa9□□□□□ -0.97
MSH5-218ENST00000494646 PLA2G16P53816 162 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ETF1P62495 437 aaKnown RBP9□□□□□ -0.97
MSH5-218ENST00000494646 SKP1P63208 163 aa9□□□□□ -0.97
MSH5-218ENST00000494646 SLC7A5Q01650 507 aa9□□□□□ -0.97
MSH5-218ENST00000494646 OR1C1Q15619 314 aa9□□□□□ -0.97
MSH5-218ENST00000494646 KBTBD12Q3ZCT8 623 aa9□□□□□ -0.97
MSH5-218ENST00000494646 GRTP1Q5TC63 336 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ZNF468Q5VIY5 522 aaPredicted RBP9□□□□□ -0.97
MSH5-218ENST00000494646 PRAMEF9Q5VWM5 478 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ADNP2Q6IQ32 1131 aa9□□□□□ -0.97
MSH5-218ENST00000494646 TMIGD1Q6UXZ0 262 aa9□□□□□ -0.97
MSH5-218ENST00000494646 RAPH1Q70E73 1250 aa9□□□□□ -0.97
MSH5-218ENST00000494646 RPS19BP1Q86WX3 136 aaKnown RBP9□□□□□ -0.97
MSH5-218ENST00000494646 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9□□□□□ -0.97
MSH5-218ENST00000494646 SNX31Q8N9S9 440 aa9□□□□□ -0.97
MSH5-218ENST00000494646 FBXO25Q8TCJ0 367 aa9□□□□□ -0.97
MSH5-218ENST00000494646 ELP5Q8TE02 316 aa9□□□□□ -0.97
MSH5-218ENST00000494646 TMEM79Q9BSE2 394 aa9□□□□□ -0.97
MSH5-218ENST00000494646 RNF32Q9H0A6 362 aa9□□□□□ -0.97
MSH5-218ENST00000494646 DNAJC11Q9NVH1 559 aa9□□□□□ -0.97
MSH5-218ENST00000494646 CD274Q9NZQ7 290 aa9□□□□□ -0.97
MSH5-218ENST00000494646 SEC14L3Q9UDX4 400 aa9□□□□□ -0.97
MSH5-218ENST00000494646 SH3BGRL2Q9UJC5 107 aa9□□□□□ -0.97
MSH5-218ENST00000494646 UNC79Q9P2D8 2635 aa9□□□□□ -0.97
MSH5-218ENST00000494646 CSMD1Q96PZ7 3565 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 TRGV8A0A0C4DH27 118 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ESYT3A0FGR9 886 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 LRIT2A6NDA9 550 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 GABRR3A8MPY1 467 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ERI3O43414 337 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 CCNT2O60583 730 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 SH3BGRLO75368 114 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 STK16O75716 305 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 TBX6O95947 436 aaPredicted RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 CRYABP02511 175 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 STSP08842 583 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 RNH1P13489 461 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 GGT5P36269 586 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 HNRNPFP52597 415 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 RAB10P61026 200 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ATP6V0D1P61421 351 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 STXBP1P61764 594 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 DLG1Q12959 904 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 DOC2AQ14183 400 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 MAPKAPK3Q16644 382 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 XKR6Q5GH73 641 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 SULT1C3Q6IMI6 304 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 NIPAL1Q6NVV3 410 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ZDHHC24Q6UX98 284 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 QSOX2Q6ZRP7 698 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 CYS1Q717R9 158 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 GALNTL5Q7Z4T8 443 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 CMC1Q7Z7K0 106 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 KLHDC8AQ8IYD2 350 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 KRT78Q8N1N4 520 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 TMEM52Q8NDY8 209 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 DNAJB8Q8NHS0 232 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 FBF1Q8TES7 1133 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 THAP3Q8WTV1 239 aaPredicted RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 SREK1Q8WXA9 508 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 MS4A6EQ96DS6 147 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 F2RL3Q96RI0 385 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 GPR22Q99680 433 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 LRRC1Q9BTT6 524 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 CAPS2Q9BXY5 557 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 DEFB126Q9BYW3 111 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 TSPAN10Q9H1Z9 355 aaPredicted RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 ALG9Q9H6U8 611 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 NT5DC2Q9H857 520 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 PRDM9Q9NQV7 894 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 PNO1Q9NRX1 252 aaKnown RBP8.99□□□□□ -0.97
MSH5-218ENST00000494646 LRFN1Q9P244 771 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ABI3Q9P2A4 366 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 RNF112Q9ULX5 631 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 ASB1Q9Y576 335 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 NOTCH2Q04721 2471 aa8.99□□□□□ -0.97
MSH5-218ENST00000494646 LRBAP50851 2863 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 A0A1B0GUH1 482 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 TCRBV16S1A1N1A0A5B0 115 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 NEURL1O76050 574 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 MYO1DO94832 1006 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 S100BP04271 92 aaPredicted RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 SP1P08047 785 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 CD46P15529 392 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 TPP2P29144 1249 aaPredicted RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 EEF1DP29692 281 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 PPP2R1BP30154 601 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 DCTP40126 519 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 PER3P56645 1201 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 TAS2R50P59544 299 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 IRF8Q02556 426 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 CAV1Q03135 178 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 CHIT1Q13231 466 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 SLMAPQ14BN4 828 aa8.98□□□□□ -0.97
MSH5-218ENST00000494646 EFTUD2Q15029 972 aaKnown RBP eCLIP8.98□□□□□ -0.97
MSH5-218ENST00000494646 ZRSR2Q15696 482 aaKnown RBP8.98□□□□□ -0.97
MSH5-218ENST00000494646 INAQ16352 499 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms