RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 FBXO17Q96EF6 278 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SLC47A1Q96FL8 570 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 THOC1Q96FV9 657 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 BSCL2Q96G97 398 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 OXNAD1Q96HP4 312 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SENP8Q96LD8 212 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 APOLD1Q96LR9 279 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 LRFN5Q96NI6 719 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 BTBD9Q96Q07 612 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 OR1F2PQ96R84 312 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 CHP1Q99653 195 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SEPT5Q99719 369 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 TSG101Q99816 390 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SPAG8Q99932 426 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 KCNS3Q9BQ31 491 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 FAM213AQ9BRX8 229 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SPATA16Q9BXB7 569 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 TDRD1Q9BXT4 1180 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 GON7Q9BXV9 100 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 FRMD8P1Q9BZ68 369 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 DNTTIP1Q9H147 329 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 RHBGQ9H310 441 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 AUNIPQ9H7T9 357 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 COG4Q9H9E3 785 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ACTR5Q9H9F9 607 aaPredicted RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 LMAN1LQ9HAT1 526 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 UPF2Q9HAU5 1272 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 MAGEF1Q9HAY2 307 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 CYP3A43Q9HB55 503 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 NEK6Q9HC98 313 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 VAT1LQ9HCJ6 419 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 EPB41L5Q9HCM4 733 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 KCNMB3Q9NPA1 279 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SLC22A11Q9NSA0 550 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SLC6A13Q9NSD5 602 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 FKBP14Q9NWM8 211 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SLC39A1Q9NY26 324 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 CNOT2Q9NZN8 540 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 KIAA1456Q9P272 454 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 ATXN10Q9UBB4 475 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 CNOT8Q9UFF9 292 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SLC24A2Q9UI40 661 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 FBXO4Q9UKT5 387 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 PADI2Q9Y2J8 665 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 BZW2Q9Y6E2 419 aaKnown RBP2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SMAD5-AS1Q9Y6J3 95 aa2.1□□□□□ -2.07
PTPN12-212ENST00000494248 SAA2-SAA4A0A096LPE2 208 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 TRBV5-7A0A0A0MS05 114 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1B0GUL7 405 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 MACROD2A1Z1Q3 448 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 C17orf102A2RUQ5 167 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 FAM149AA5PLN7 773 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 MAGEA13PA6NCF6 341 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 ANKDD1BA6NHY2 528 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 GABRR3A8MPY1 467 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 H3BMM5 538 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 SNAP23O00161 211 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 NDUFS4O43181 175 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 PPIP5K2O43314 1243 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 DCXO43602 365 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 LANCL1O43813 399 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 KLK8O60259 260 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 HBP1O60381 514 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CDH16O75309 829 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CSO75390 466 aaKnown RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 VPS26AO75436 327 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 GPC4O75487 556 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 RAD51DO75771 328 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 MYO1DO94832 1006 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 SORBS2O94875 1100 aaKnown RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CDK14O94921 469 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 NKX2-2O95096 273 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 NDUFB10O96000 172 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 KRT6AP02538 564 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 HEXAP06865 529 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 MMP10P09238 476 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CYP4B1P13584 511 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 HOXB9P17482 250 aaPredicted RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 AMD1P17707 334 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 SRMP19623 302 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 HTR2AP28223 471 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 C21orf33P30042 268 aaPredicted RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 HOXC9P31274 260 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 SLC6A6P31641 620 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 AKT2P31751 481 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 RORAP35398 523 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 GJC1P36383 396 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 MAP2K2P36507 400 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 ATP5C1P36542 298 aaKnown RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 SLC1A3P43003 542 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 BLKP51451 505 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CNN1P51911 297 aaKnown RBP2.09□□□□□ -2.07
PTPN12-212ENST00000494248 EFNA5P52803 228 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 ARSFP54793 590 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CDH12P55289 794 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 CDH13P55290 713 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 TMPRSS3P57727 454 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 FOXL2P58012 376 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 ARPC4P59998 168 aa2.09□□□□□ -2.07
PTPN12-212ENST00000494248 TSPAN5P62079 268 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms