RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 NOTCH4Q99466 2003 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 BRCA2P51587 3418 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 KMOO15229 486 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 XPNPEP2O43895 674 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 KCNJ13O60928 360 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 NUDT7P0C024 238 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ARAFP10398 606 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CYP4B1P13584 511 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ETFAP13804 333 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DDCP20711 480 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 HTR1BP28222 390 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 GGT2P36268 569 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CCR8P51685 355 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 HMGA2P52926 109 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 GP2P55259 537 aaKnown RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 KCNC4Q03721 635 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 NFE2L1Q14494 772 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF846Q147U1 533 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 SF1Q15637 639 aaKnown RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 MICAQ29983 383 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF385BQ569K4 471 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TCEAL5Q5H9L2 206 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DEPDC1Q5TB30 811 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF697Q5TEC3 545 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 KHDRBS2Q5VWX1 349 aaKnown RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PNCKQ6P2M8 343 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 Q6ZNX1 250 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TRIM74Q86UV6 250 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 P2RY8Q86VZ1 359 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DENND6BQ8NEG7 585 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ABHD11Q8NFV4 315 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TTLQ8NG68 377 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 OR10G2Q8NGC3 310 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 OR5K2Q8NHB8 316 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 VMP1Q96GC9 406 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 LRRC3BQ96PB8 259 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 BARD1Q99728 777 aaKnown RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PREBQ9HCU5 417 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 LTB4R2Q9NPC1 389 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PAK1IP1Q9NWT1 392 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 GDE1Q9NZC3 331 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DOCK6Q96HP0 2047 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TBC1D3BA6NDS4 549 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TMEM247A6NEH6 219 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CLDN24A6NM45 220 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 K7ESM1 405 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CAPN5O15484 640 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 INMTO95050 263 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DIRAS1O95057 198 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 HLA-EP13747 358 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 RHCEP18577 417 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ACVR2AP27037 513 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 FMO3P31513 532 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 VIPR2P41587 438 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 BMXP51813 675 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 MAPK12P53778 367 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 DSTNP60981 165 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TRA2BP62995 288 aaKnown RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 SPIBQ01892 262 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CNTN1Q12860 1018 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CLCA4Q14CN2 919 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 AGERQ15109 404 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 CTF1Q16619 201 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 FAM78AQ5JUQ0 283 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 METRNLQ641Q3 311 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ADNP2Q6IQ32 1131 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 REEP3Q6NUK4 255 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 SLC16A12Q6ZSM3 486 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 C11orf96Q7Z7L8 435 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PARP8Q8N3A8 854 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 SMYD1Q8NB12 490 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 NFKBIDQ8NI38 313 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 WDR48Q8TAF3 677 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 BADQ92934 168 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 MAL2Q969L2 176 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 FEVQ99581 238 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PIP5K1AQ99755 562 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 MAPKAP1Q9BPZ7 522 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TMEM106CQ9BVX2 250 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 RAB11FIP5Q9BXF6 653 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 TRPV4Q9HBA0 871 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 EXD2Q9NVH0 621 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 ERVK-18Q9QC07 812 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
NPHP3-209ENST00000493732 HEMK1Q9Y5R4 338 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-209ENST00000493732 PCM1Q15154 2024 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 HEPACAM2A8MVW5 462 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 C5orf58C9J3I9 102 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 CLDN25C9JDP6 229 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 GCM2O75603 506 aaPredicted RBP9.22□□□□□ -0.93
NPHP3-209ENST00000493732 IFNW1P05000 195 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 IL3P08700 152 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 SLC35G4P0C7Q5 338 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 AQP1P29972 269 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 SOAT1P35610 550 aa9.22□□□□□ -0.93
NPHP3-209ENST00000493732 EIF2DP41214 584 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms