RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CA12O43570 354 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 ITGA5P08648 1049 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 C6orf136Q5SQH8 315 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 TCEANCQ8N8B7 351 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 ORAI3Q9BRQ5 295 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 NSUN3Q9H649 340 aaKnown RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 XKR8Q9H6D3 395 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 CRTAC1Q9NQ79 661 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 INHAP05111 366 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 ARF3P61204 181 aaPredicted RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 ARF1P84077 181 aaKnown RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 POU4F2Q12837 409 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 GPR17Q13304 367 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 RNF130Q86XS8 419 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 FANK1Q8TC84 345 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 TTC34A8MYJ7 566 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 HCKP08631 526 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 ZNF8P17098 575 aaPredicted RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 HERV-K104P61576 105 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 CLCA4Q14CN2 919 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 CTC1Q2NKJ3 1217 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 SUN3Q8TAQ9 357 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 SH2B3Q9UQQ2 575 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 SH3PXD2BA1X283 911 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 LRRN1Q6UXK5 716 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 LRP10Q7Z4F1 713 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 TMEM184CQ9NVA4 438 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 ACSL5Q9ULC5 683 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 SLC33A1O00400 549 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 RFPL1O75677 317 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 OXSR1O95747 527 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 RPL6Q02878 288 aaKnown RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 PIGGQ5H8A4 983 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 DCDC5Q6ZRR9 648 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 SLC9B2Q86UD5 537 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 ZFAND4Q86XD8 727 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 DOHHQ9BU89 302 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 NRLP54845 237 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 HNRNPA0Q13151 305 aaKnown RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 ZSCAN4Q8NAM6 433 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 GKN1Q9NS71 199 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 DNAJC27Q9NZQ0 273 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 LIPT1Q9Y234 373 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 H7C2Y5 167 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 SCGB1D2O95969 90 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 ZNF182P17025 639 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 CDKL4Q5MAI5 379 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 GPRC6AQ5T6X5 926 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 SLC27A4Q6P1M0 643 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 SLC15A3Q8IY34 581 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 MFSD2AQ8NA29 543 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 MCHR1Q99705 422 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 PIP5K1AQ99755 562 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 CMKLR1Q99788 373 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 DLGAP4Q9Y2H0 992 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 BORCS7-ASMTA0A0B4J1R7 106 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 SH3D21A4FU49 640 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 PRKCGP05129 697 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 HAPLN1P10915 354 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 MECP2P51608 486 aaKnown RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 C6orf141Q5SZD1 244 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 KCTD18Q6PI47 426 aaPredicted RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 TMED4Q7Z7H5 227 aa19.42■□□□□ 0.7
RNF40-203ENST00000493683 MMAAQ8IVH4 418 aaKnown RBP19.42■□□□□ 0.7
RNF40-203ENST00000493683 C10orf71Q711Q0 1435 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 C2orf92A0A1B0GVN3 265 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 EEDO75530 441 aaKnown RBP19.41■□□□□ 0.7
RNF40-203ENST00000493683 SPIN3Q5JUX0 258 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 TSTD1Q8NFU3 115 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 TTYH2Q9BSA4 534 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 TMEM168Q9H0V1 697 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 ZNF696Q9H7X3 374 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 ZNF395Q9H8N7 513 aaPredicted RBP19.41■□□□□ 0.7
RNF40-203ENST00000493683 SEC61A2Q9H9S3 476 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 SPEF2Q9C093 1822 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 ZNF541Q9H0D2 1346 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 SOBPA7XYQ1 873 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 E7ESA3 106 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 MUSKO15146 869 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 LHCGRP22888 699 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 ST3GAL4Q11206 333 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 BCL7BQ9BQE9 202 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 RBPJLQ9UBG7 517 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 PRODH2Q9UF12 536 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 OARD1Q9Y530 152 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 CFHP08603 1231 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 MAGEA8P43361 318 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 GINS1Q14691 196 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 RAB39AQ14964 217 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 HSD17B12Q53GQ0 312 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 XKR5Q6UX68 686 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 NAPRTQ6XQN6 538 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 MINDY1Q8N5J2 469 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 KLHL33A6NCF5 533 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 PPM1BO75688 479 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 CH25HO95992 272 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 CHRNA1P02708 482 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 SHMT2P34897 504 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 CDKN1CP49918 316 aaPredicted RBP19.41■□□□□ 0.7
RNF40-203ENST00000493683 MPP2Q14168 576 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms