RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TEFMQ96QE5 360 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MBOAT4Q96T53 435 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ZPBPQ9BS86 351 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CCM2Q9BSQ5 444 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GAREM1Q9H706 876 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 BEX1Q9HBH7 125 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 RBFOX1Q9NWB1 397 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PLEKHA6Q9Y2H5 1048 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHA11Q9Y5I1 949 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 STYXL1Q9Y6J8 313 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GPR171O14626 319 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 PROM1O43490 865 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LILRB5O75023 590 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 AP2A2O94973 939 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OR56A5P0C7T3 313 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 RAP2AP10114 183 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF14P17017 642 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 PFKLP17858 780 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OR1G1P47890 313 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 PLXNA3P51805 1871 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 NR0B1P51843 470 aaKnown RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 NUDT6P53370 316 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 RAC1P63000 192 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 FOXK2Q01167 660 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 CAP1Q01518 475 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 FAM83EQ2M2I3 478 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 MPEG1Q2M385 716 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 KLHL22Q53GT1 634 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 IER5Q5VY09 327 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LBX2Q6XYB7 198 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 KIAA0907Q7Z7F0 614 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 CRYBG2Q8N1P7 616 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LIX1Q8N485 282 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OR52K2Q8NGK3 314 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GLYATL2Q8WU03 294 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 TSPEARQ8WU66 669 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 BRI3BPQ8WY22 251 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LPAR1Q92633 364 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 FAM162AQ96A26 154 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LRRC58Q96CX6 371 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GINS4Q9BRT9 223 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 UGT2B28Q9BY64 529 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 AGO4Q9HCK5 861 aaKnown RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 KLHL1Q9NR64 748 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 XPR1Q9UBH6 696 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF214Q9UL59 606 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 EVPLQ92817 2033 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 TTC24A2A3L6 582 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-205ENST00000493587 PPEF2O14830 753 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 SLC16A6O15403 523 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 SDC3O75056 442 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 VPS26AO75436 327 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 HPRP00739 348 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 HSD17B1P14061 328 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 EDNRBP24530 442 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GRK5P34947 590 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ACTR1BP42025 376 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ACLYP53396 1101 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GRIN2CQ14957 1233 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OCLNQ16625 522 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 FBXO48Q5FWF7 155 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GPRC6AQ5T6X5 926 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 EFCAB12Q6NXP0 572 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 SERINC5Q86VE9 423 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ADHFE1Q8IWW8 467 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ADGRG2Q8IZP9 1017 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 RNF139Q8WU17 664 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 UPRTQ96BW1 309 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 MS4A3Q96HJ5 214 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 SLC38A2Q96QD8 506 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OR5M11Q96RB7 305 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 GAL3ST4Q96RP7 486 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 LGMNQ99538 433 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 MUC13Q9H3R2 512 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 R3HDMLQ9H3Y0 253 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 EQTNQ9NQ60 294 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 ASAH2Q9NR71 780 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 OXSMQ9NWU1 459 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 TREM2Q9NZC2 230 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 COMMD3Q9UBI1 195 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 COQ4Q9Y3A0 265 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 DMRT1Q9Y5R6 373 aa6.61□□□□□ -1.35
VPS13B-205ENST00000493587 TISP43B9A030 160 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 WASH3PC4AMC7 463 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SLC43A1O75387 559 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 RBBP9O75884 186 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CDRT1O95170 752 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 METTL18O95568 372 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ALPIP09923 528 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CKBP12277 381 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 RAB4AP20338 218 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SLC6A2P23975 617 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 GDI1P31150 447 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms