RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CLK1P49759 484 aaKnown RBP3.39□□□□□ -1.87
CLK1-213ENST00000492793 IRX4P78413 519 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 UBXN1Q04323 297 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 KRT81Q14533 505 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 MRGPRG-AS1Q2M3A8 158 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 FASTKD1Q53R41 847 aaKnown RBP3.39□□□□□ -1.87
CLK1-213ENST00000492793 SPANXN4Q5MJ08 99 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ALKBH5Q6P6C2 394 aaKnown RBP3.39□□□□□ -1.87
CLK1-213ENST00000492793 LCLAT1Q6UWP7 414 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TMEM64Q6YI46 380 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TOM1L2Q6ZVM7 507 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 LRRTM1Q86UE6 522 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 CATSPERDQ86XM0 798 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SLC43A2Q8N370 569 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 METTL4Q8N3J2 472 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TMEM99Q8N816 258 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 OR52B6Q8NGF0 335 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 MGARPQ8TDB4 240 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SMPDL3AQ92484 453 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 GGHQ92820 318 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SLC35C1Q96A29 364 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 CFAP36Q96G28 342 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ATXN7L3BQ96GX2 97 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 LINC00479Q96M42 142 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 AGAP3Q96P47 875 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ZNF300Q96RE9 604 aaPredicted RBP3.39□□□□□ -1.87
CLK1-213ENST00000492793 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ACAT2Q9BWD1 397 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 LRRC2Q9BYS8 371 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 MRPL17Q9NRX2 175 aaKnown RBP3.39□□□□□ -1.87
CLK1-213ENST00000492793 ZDHHC18Q9NUE0 388 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TMEM181Q9P2C4 612 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 THEGQ9P2T0 379 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 KLK11Q9UBX7 282 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SNX5Q9Y5X3 404 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ZHX2Q9Y6X8 837 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TDRD15B5MCY1 1934 aaKnown RBP3.38□□□□□ -1.87
CLK1-213ENST00000492793 NKX6-3A6NJ46 265 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 KPNA7A9QM74 516 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 CHUKO15111 745 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 ATP6V1G1O75348 118 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 AKAP3O75969 853 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 ZSCAN5DPP0CG00 497 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 RNF224P0DH78 156 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 P4HA1P13674 534 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 FERP16591 822 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 KCNK10P57789 538 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 GALK2Q01415 458 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 RPA4Q13156 261 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 GCKRQ14397 625 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 C2orf76Q3KRA6 126 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 C14orf177Q52M58 125 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 KCTD11Q693B1 232 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 TRIM65Q6PJ69 517 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 FRRS1Q6ZNA5 592 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 Q6ZVQ6 151 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 SLC22A15Q8IZD6 547 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 AQP11Q8NBQ7 271 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 OR9Q2Q8NGE9 314 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 SPATA18Q8TC71 538 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 SNX21Q969T3 373 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 CABS1Q96KC9 395 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 MCRIP2Q9BUT9 160 aaKnown RBP3.38□□□□□ -1.87
CLK1-213ENST00000492793 PAPOLGQ9BWT3 736 aaKnown RBP3.38□□□□□ -1.87
CLK1-213ENST00000492793 ACPTQ9BZG2 426 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 NUDT4Q9NZJ9 180 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 EXOC6BQ9Y2D4 811 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 NEDD4P46934 1319 aa3.38□□□□□ -1.87
CLK1-213ENST00000492793 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 TMCO5BA8MYB1 307 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 NPIPB9F8W1W9 429 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 TFECO14948 347 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 KINO60870 393 aaKnown RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 KERAO60938 352 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 RTN2O75298 545 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 CHRNGP07510 517 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 KRT3P12035 628 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 DPEP1P16444 411 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ACKR3P25106 362 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 OXTRP30559 389 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 KHKP50053 298 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 KIAA1024LP59773 190 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 GFPT1Q06210 699 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 NPRL3Q12980 569 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ZNF177Q13360 481 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 FASTKD3Q14CZ7 662 aaKnown RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 C3AR1Q16581 482 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 SGCBQ16585 318 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 MOGAT2Q3SYC2 334 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 ZNF776Q68DI1 518 aaPredicted RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 SNRNP48Q6IEG0 339 aaKnown RBP3.37□□□□□ -1.87
CLK1-213ENST00000492793 CARNMT1Q8N4J0 409 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 CLEC1AQ8NC01 280 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 CCDC197Q8NCU1 140 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 GPR148Q8TDV2 347 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 SAP25Q8TEE9 199 aa3.37□□□□□ -1.87
CLK1-213ENST00000492793 GANCQ8TET4 914 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms