RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 MTO1Q9Y2Z2 717 aaKnown RBP17.21■□□□□ 0.35
SMIM4-205ENST00000491607 CELSR2Q9HCU4 2923 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 SCN2AQ99250 2005 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 IGKV3D-11A0A0A0MRZ8 115 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ENO4A6NNW6 628 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 PHGDHO43175 533 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ERI3O43414 337 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 MYO1DO94832 1006 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 GRNP28799 593 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 HNRNPH1P31943 449 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 MLF1P58340 268 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ART3Q13508 389 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 C3AR1Q16581 482 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 FBXO48Q5FWF7 155 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 RPTNQ6XPR3 784 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 KRT78Q8N1N4 520 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF808Q8N4W9 903 aaPredicted RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 NFAM1Q8NET5 270 aaPredicted RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ANP32BQ92688 251 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 TMEM125Q96AQ2 219 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 TSPAN17Q96FV3 270 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 MCMBPQ9BTE3 642 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 CAPS2Q9BXY5 557 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 PNO1Q9NRX1 252 aaKnown RBP17.2■□□□□ 0.34
SMIM4-205ENST00000491607 CRYBG3Q68DQ2 2970 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 ZGRF1Q86YA3 2104 aa17.2■□□□□ 0.34
SMIM4-205ENST00000491607 SVILO95425 2214 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 A0A088AWK7 358 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 TRBV11-1A0A0K0K1C0 115 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 LRIT2A6NDA9 550 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 ANKDD1BA6NHY2 528 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 CXorf49A8MYA2 514 aaPredicted RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 FCHO1O14526 889 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 CLGNO14967 610 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 NME2P1O60361 137 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF24P17028 368 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 ZNF10P21506 573 aaPredicted RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 NME2P22392 152 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 PLA2G16P53816 162 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 ILF2Q12905 390 aaKnown RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 GPSM1Q86YR5 675 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 SPPL2CQ8IUH8 684 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 KLHDC8AQ8IYD2 350 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 TCAIMQ8N3R3 496 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 CPSF7Q8N684 471 aaKnown RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 SNX31Q8N9S9 440 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 MS4A6EQ96DS6 147 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 TMEM79Q9BSE2 394 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 PRM3Q9NNZ6 103 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 PRTFDC1Q9NRG1 225 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 DNAJC11Q9NVH1 559 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 GPRC5BQ9NZH0 403 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 PYCARDQ9ULZ3 195 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 MMACHCQ9Y4U1 282 aa17.19■□□□□ 0.34
SMIM4-205ENST00000491607 KLF2Q9Y5W3 355 aaPredicted RBP17.19■□□□□ 0.34
SMIM4-205ENST00000491607 CDK2AP1O14519 115 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 TAPBPO15533 448 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 B3GALT2O43825 422 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 PRF1P14222 555 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 ABOP16442 354 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 STMN1P16949 149 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 GSTM2P28161 218 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 HSPA7P48741 367 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 HLCSP50747 726 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 CLCN2P51788 898 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 SLC13A2Q13183 592 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 RUNX2Q13950 521 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 TRIM40Q6P9F5 258 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 BNC2Q6ZN30 1099 aaPredicted RBP17.18■□□□□ 0.34
SMIM4-205ENST00000491607 MCEMP1Q8IX19 187 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 FAM47BQ8NA70 645 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 B3GNT7Q8NFL0 401 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 EXT2Q93063 718 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 ESAMQ96AP7 390 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 RBBP8Q99708 897 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 CPNE1Q99829 537 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 ERP44Q9BS26 406 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 NPLQ9BXD5 320 aaPredicted RBP17.18■□□□□ 0.34
SMIM4-205ENST00000491607 REXO4Q9GZR2 422 aaKnown RBP17.18■□□□□ 0.34
SMIM4-205ENST00000491607 RUBCNLQ9H714 662 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 CD274Q9NZQ7 290 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 FBXW2Q9UKT8 454 aa17.18■□□□□ 0.34
SMIM4-205ENST00000491607 TCRBV9S1A1TA0A576 114 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 CLDN4O14493 209 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 FANCGO15287 622 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ZNHIT1O43257 154 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ASNA1O43681 348 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 CLEC3AO75596 197 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 WISP3O95389 354 aaPredicted RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 S100BP04271 92 aaPredicted RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 HTR1EP28566 365 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 TNFRSF8P28908 595 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 HPDP32754 393 aaPredicted RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 TRHRP34981 398 aaPredicted RBP17.17■□□□□ 0.34
SMIM4-205ENST00000491607 HSD17B7P56937 341 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 RAB38P57729 211 aa17.17■□□□□ 0.34
SMIM4-205ENST00000491607 ATP6V0D1P61421 351 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms