RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 C10orf90Q96M02 699 aa20.64■□□□□ 0.9
VCPKMT-204ENST00000491402 MYLK2Q9H1R3 596 aa20.64■□□□□ 0.9
VCPKMT-204ENST00000491402 SDR39U1Q9NRG7 319 aaPredicted RBP20.64■□□□□ 0.9
VCPKMT-204ENST00000491402 WDFY3Q8IZQ1 3526 aa20.64■□□□□ 0.9
VCPKMT-204ENST00000491402 ANXA4P09525 319 aaPredicted RBP20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 PRPS2P11908 318 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 IL1RNP18510 177 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 TACR1P25103 407 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 BTN3A2P78410 334 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 FOXC1Q12948 553 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 TARDBPQ13148 414 aaKnown RBP eCLIP20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 UBAP2LQ14157 1087 aaKnown RBP20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 HERC3Q15034 1050 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 GARNL3Q5VVW2 1013 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 TLDC1Q6P9B6 456 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 CYP20A1Q6UW02 462 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 PRSS41Q7RTY9 318 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 BMPERQ8N8U9 685 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 AMER3Q8N944 861 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 QRFPRQ96P65 431 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 DEPDC7Q96QD5 511 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 CMKLR1Q99788 373 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 STRADBQ9C0K7 418 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 ARMCX1Q9P291 453 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 BAIAP2L1Q9UHR4 511 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 PTPRBP23467 1997 aa20.64■□□□□ 0.89
VCPKMT-204ENST00000491402 A0A0A6YYD5 115 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ARHGAP10A1A4S6 786 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 TMX2-CTNND1H3BSU7 103 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 MED26O95402 600 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ATP5A1P25705 553 aaKnown RBP20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 CERS1P27544 350 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ATP4BP51164 291 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 EMP3P54852 163 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 STX1BP61266 288 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ZNF763Q0D2J5 394 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 SQLEQ14534 574 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 NDUFA9Q16795 377 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 CCNYL2Q5T2Q4 361 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 TMPRSS7Q7RTY8 843 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 CPSF7Q8N684 471 aaKnown RBP20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ACOT4Q8N9L9 421 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 TTC29Q8NA56 475 aaPredicted RBP20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 ERP27Q96DN0 273 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 TSSK3Q96PN8 268 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 COPS7BQ9H9Q2 264 aaPredicted RBP20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 RARRES3Q9UL19 164 aa20.63■□□□□ 0.89
VCPKMT-204ENST00000491402 A0A088AWK7 358 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 KLHL18O94889 574 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 SCELO95171 688 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 ZNF10P21506 573 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MTTPP55157 894 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 FAM53BQ14153 422 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 RPS6KA2Q15349 733 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MUM1Q2TAK8 710 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 PRAMEF17Q5VTA0 474 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 RIPOR1Q6ZS17 1223 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CLNKQ7Z7G1 428 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 PDSS2Q86YH6 399 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MIER2Q8N344 545 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 GALNT15Q8N3T1 639 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 ZCCHC7Q8N3Z6 543 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 FITM2Q8N6M3 262 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CLHC1Q8NHS4 586 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 EGLN2Q96KS0 407 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 ROGDIQ9GZN7 287 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MRGBPQ9NV56 204 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 AKAP7Q9P0M2 348 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 TMPRSS11DO60235 418 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 GALR3O60755 368 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CCL4P13236 92 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 GCGRP47871 477 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MRPL19P49406 292 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 MAPK12P53778 367 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 NME5P56597 212 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 IRX1P78414 480 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 FAM214AQ32MH5 1076 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 PDCD4Q53EL6 469 aaKnown RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CYB5D1Q6P9G0 228 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 LIN37Q96GY3 246 aaPredicted RBP20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 SERINC2Q96SA4 455 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 ACTL8Q9H568 366 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 ANKHQ9HCJ1 492 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 APMAPQ9HDC9 416 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CUTCQ9NTM9 273 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 NAALAD2Q9Y3Q0 740 aa20.62■□□□□ 0.89
VCPKMT-204ENST00000491402 CACNA1AO00555 2505 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 SEC16AO15027 2179 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 ANKRD28O15084 1053 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 ZNF749O43361 778 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 GPX3P22352 226 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 IL11RAQ14626 422 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 TRPM8Q7Z2W7 1104 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 BPHLQ86WA6 291 aaPredicted RBP20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 PPP1R3BQ86XI6 285 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 DTWD1Q8N5C7 304 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 SLC45A3Q96JT2 553 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 NDC1Q9BTX1 674 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 LOXL2Q9Y4K0 774 aa20.61■□□□□ 0.89
VCPKMT-204ENST00000491402 FOXS1O43638 330 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms