RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MAP1AP78559 2803 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 MYO5AQ9Y4I1 1855 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 EVPLQ92817 2033 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 DVL1O14640 695 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 EXTL3O43909 919 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 CLDN1O95832 211 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 ZFYP08048 801 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 HOXB7P09629 217 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 GM2AP17900 193 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 GNAZP19086 355 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 JAK1P23458 1154 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 ACAT1P24752 427 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 TKTP29401 623 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 IL15P40933 162 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 KCNJ1P48048 391 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 LHX1P48742 406 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 DHPSP49366 369 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 CLCN4P51793 760 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 MLLT10P55197 1068 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 RPS18P62269 152 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 EEF1A1P68104 462 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 ZBTB17Q13105 803 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 DUOXA1Q1HG43 343 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 ASPRV1Q53RT3 343 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 LRRC73Q5JTD7 316 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 EEF1A1P5Q5VTE0 462 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 PACS1Q6VY07 963 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 NUP54Q7Z3B4 507 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 NHLRC2Q8NBF2 726 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 CTCFLQ8NI51 663 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 ELP5Q8TE02 316 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 RNF128Q8TEB7 428 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 PHF21BQ96EK2 531 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 THOC1Q96FV9 657 aaKnown RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 LRRC3BQ96PB8 259 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 POLR3CQ9BUI4 534 aaPredicted RBP4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 DNAI2Q9GZS0 605 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 CWH43Q9H720 699 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 VCPKMTQ9H867 229 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 DONSONQ9NYP3 566 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 SEPT10Q9P0V9 454 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 B3GAT1Q9P2W7 334 aa4.52□□□□□ -1.69
SSX2IP-208ENST00000490476 WNK1Q9H4A3 2382 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 FAM90A10PA6NDY2 464 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 C5orf60A6NFR6 353 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 NEMP2A6NFY4 417 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 TRIM64A6NGJ6 449 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 TRIM64BA6NI03 449 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 STX6O43752 255 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 BMP15O95972 392 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 ZNF286BP0CG31 522 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SFTPCP11686 197 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 ADRA2CP18825 462 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 CASTP20810 708 aaKnown RBP4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 MCCP23508 829 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 AHRP35869 848 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 KRT2P35908 639 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 TCF7P36402 384 aaPredicted RBP4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 WNT5AP41221 380 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 EGR4Q05215 589 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 LTBQ06643 244 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SNTA1Q13424 505 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 VEZF1Q14119 521 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 GIT2Q14161 759 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 CCDC158Q5M9N0 1113 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 PRR27Q6MZM9 219 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 IYDQ6PHW0 289 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 ENPP7Q6UWV6 458 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 PIWIL4Q7Z3Z4 852 aaKnown RBP4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SYCP3Q8IZU3 236 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 IQCF1Q8N6M8 205 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 L3MBTL4Q8NA19 623 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 GRK7Q8WTQ7 553 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 ATP6V0A1Q93050 837 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 RTP4Q96DX8 246 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 BTBD10Q9BSF8 475 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 INPP5KQ9BT40 448 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 C1QTNF7Q9BXJ2 289 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 ZBP1Q9H171 429 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 GAREM1Q9H706 876 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 CDH20Q9HBT6 801 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SERINC1Q9NRX5 453 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SLC38A7Q9NVC3 462 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 SPG21Q9NZD8 308 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 MTRRQ9UBK8 725 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 CDH7Q9ULB5 785 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 TMED3Q9Y3Q3 217 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 NME7Q9Y5B8 376 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 PKDREJQ9NTG1 2253 aa4.51□□□□□ -1.69
SSX2IP-208ENST00000490476 A0A0G2JNG1 304 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 K7ENP7 123 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 HAS3O00219 553 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 KCNAB3O43448 404 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 GOSR1O95249 250 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms